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Sodium in PDB, part 274 (files: 10921-10960), PDB 8elk-8fbx

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 10921-10960 (PDB 8elk-8fbx).
  1. 8elk (Na: 1) - Hras R97F Crystal Form 1
    Other atoms: Ca (2); Mg (2);
  2. 8ell (Na: 2) - Apo Human Biliverdin Reductase Beta (Cryogenic)
  3. 8elm (Na: 1) - Apo Human Biliverdin Reductase Beta (293K)
  4. 8emd (Na: 2) - Human Pu.1 Ets-Domain (165-270) Q226E Mutant Bound to D(Aataagcggaagtggg)
  5. 8en9 (Na: 1) - Teha Native-Sad Structure Determined at 5 Kev with A Helium Environment
    Other atoms: Cl (2);
  6. 8eng (Na: 2) - Human Pu.1 Ets-Domain (165-270) Bound to D(Aataagcggaagtggg) with Hemi-Methylated Cpg (Forward Strand)
  7. 8eo1 (Na: 1) - Human Pu.1 Ets-Domain (165-270) Bound to D(Aataagcggaagtggg) with Hemi-Methylated Cpg (Reverse Strand)
  8. 8eo4 (Na: 1) - Human Pu.1 Ets-Domain (165-270) Bound to D(Aataagcggaagtggg) with Di- Methylated Cpg Sites
  9. 8eog (Na: 1) - Structure of the Human L-Type Voltage-Gated Calcium Channel CAV1.2 Complexed with L-Leucine
    Other atoms: Ca (3);
  10. 8eqg (Na: 1) - Human Pu.1 Ets-Domain (165-270) Bound to D(Aataaa(Du)Ggaagtggg)
  11. 8eqk (Na: 3) - Human Pu.1 Ets-Domain (165-270) Bound to D(Aataaccggaagtggg)
  12. 8eql (Na: 2) - Human Pu.1 Ets-Domain (165-270) Q226E Mutant Bound to D(Aataaccggaagtggg)
  13. 8esx (Na: 1) - Hiv Protease in Complex with Benzoxaborolone Analog of Darunavir
    Other atoms: Cl (3);
  14. 8etk (Na: 4) - Bile Salt Hydrolase A From Lactobacillus Gasseri Bound to Covalent Probe
  15. 8etx (Na: 2) - Ancestral Petase 55_547
    Other atoms: Cl (1);
  16. 8ety (Na: 1) - Ancestral Petase 35_442
  17. 8etz (Na: 1) - Ancestral Petase 35_442 Mutant E13D
  18. 8eu0 (Na: 5) - Ancestral Petase 35_442 Mutant E27Q
  19. 8eu1 (Na: 2) - Ancestral Petase 35_442 Mutant F93L
  20. 8evy (Na: 1) - Ddlb From Pseudomonas Aeruginosa PAO1 in Complex with Atp and D-Ala-D- Ala
    Other atoms: Mg (6);
  21. 8ewh (Na: 4) - Salmonella Typhimurium Gtpase Bipa
  22. 8ewt (Na: 2) - Bile Salt Hydrolase A From Lactobacillus Gasseri Bound to Covalent Probe
  23. 8ey3 (Na: 3) - Contact-Dependent Growth Inhibition (Cdi) Immunity Protein From E. Coli O32:H37
    Other atoms: Fe (1);
  24. 8eya (Na: 3) - Crystal Structure of PTP1B D181A/Q262A/C215A Phosphatase Domain with A JAK2 Activation Loop Phosphopeptide
    Other atoms: Cl (4);
  25. 8ez4 (Na: 9) - Plasmodium Falciparum M17 in Complex with Inhibitor 9AA
    Other atoms: F (36); Zn (24);
  26. 8ezg (Na: 1) - Monobody 12D1 Bound to Kras(G12D)
    Other atoms: Mg (1);
  27. 8ezo (Na: 2) - Lysozyme Anomalous Dataset at 220 K and 7.1 Kev
    Other atoms: Cl (10);
  28. 8ezp (Na: 1) - Lysozyme Anomalous Dataset at 260 K and 7.1 Kev
    Other atoms: Cl (7);
  29. 8ezu (Na: 2) - Lysozyme Anomalous Dataset at 273 K and 7.1 Kev
    Other atoms: Cl (11);
  30. 8ezx (Na: 1) - Lysozyme Anomalous Dataset at 293 K and 7.1 Kev
    Other atoms: Cl (8);
  31. 8f00 (Na: 1) - Lysozyme Anomalous Dataset at 293 K and 12 Kev
    Other atoms: Cl (10);
  32. 8f0b (Na: 2) - Lysozyme Anomalous Dataset at 240 K and 7.1 Kev
    Other atoms: Cl (10);
  33. 8f0f (Na: 1) - Hiv-1 Wild Type Protease with Grl-110-19A, A Chloroacetamide Derivative Based on Darunavir As P2' Group
    Other atoms: Cl (3);
  34. 8f28 (Na: 1) - Lysozyme Structures From Single-Entity Crystallization Method Nanoac
    Other atoms: Cl (2);
  35. 8f3t (Na: 3) - Crystal Structure of Penicillin Binding Protein 5 (PBP5) T485M T499I V629E Variant Apo Form From Enterococcus Faecium
  36. 8f4s (Na: 1) - Crystal Structure of the Sars-Cov-2 2'-O-Methyltransferase with Compound 5A Bound to the Cryptic Pocket of NSP16
    Other atoms: Cl (2); Zn (2); F (3);
  37. 8f4y (Na: 2) - Crystal Structure of Sars-Cov-2 2'-O-Methyltransferase in Complex with Compound 5A Covalently Bound to NSP16 and NSP10
    Other atoms: Cl (8); F (12); Zn (2);
  38. 8f5t (Na: 8) - Rabbit Muscle Pyruvate Kinase in Complex with Sodium and Magnesium
    Other atoms: Mg (8);
  39. 8f6b (Na: 2) - Crystal Structure of Murine POLG2 Hexamer Bound to Dna
  40. 8fbx (Na: 2) - Selenosugar Synthase Senb From Variovorax Paradoxus
    Other atoms: Cl (2);
Page generated: Thu Dec 28 11:36:24 2023

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