Sodium in PDB, part 274 (files: 10921-10960),
PDB 8gq0-8icl
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 10921-10960 (PDB 8gq0-8icl).
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8gq0 (Na: 2) - Crystal Structure of BRD4 Bromodomain 1 (BD1) in Complex with STL233497
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8gqz (Na: 1) - Crystal Structure of Mitochondrial Citrate Synthase (CIT1) From Saccharomyces Cerevisiae
Other atoms:
Cl (5);
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8gr6 (Na: 2) - Crystal Structure of Pilus-Specific Sortase C From Streptococcus Sanguinis
Other atoms:
Zn (1);
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8gsg (Na: 1) - T3R3 Form of Human Insulin with Single Zn
Other atoms:
Cl (1);
Zn (1);
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8gvm (Na: 4) - The Structure of Azide-Bound Cytochrome C Oxidase Determined Using the Crystals Exposed to 20 Mm Azide Solution For 4 Days
Other atoms:
Cu (6);
Zn (2);
Fe (6);
Mg (2);
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8gyr (Na: 5) - Crystal Structure of A Variable Region Segment of Leptospira Host- Interacting Outer Surface Protein, Liga
Other atoms:
Ca (2);
Cl (1);
K (5);
I (2);
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8gz1 (Na: 2) - Cryo-Em Structure of Human NAV1.6/BETA1/BETA2,Apo State
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8h1b (Na: 1) - Crystal Structure of Mnmm From S. Aureus Complexed with Sam and Trna Anti-Codon Stem Loop (Asl) (1.55 A)
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8hap (Na: 2) - Crystal Structure of Thermostable Acetaldehyde Dehydrogenase From Hyperthermophilic Archaeon Sulfolobus Tokodaii
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8hfh (Na: 3) - Cenp-E Motor Domain in Complex with Amppnp and MG2+
Other atoms:
Mg (1);
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8hn2 (Na: 25) - Selenomethionine-Labelled Soluble Domain of Rieske Iron-Sulfur Protein From Chlorobaculum Tepidum
Other atoms:
Fe (4);
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8hp6 (Na: 3) - Crystal Structure of (S)-2-Haloacid Dehalogenase D12A Mutant
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8hy5 (Na: 1) - Structure of D-Amino Acid Oxidase Mutant R38H
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8i18 (Na: 4) - Crystal Structure of Human MTH1(G2K Mutant) in Complex with 8-Oxo-Dgtp at pH 7.7
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8i19 (Na: 5) - Crystal Structure of Human MTH1(G2K Mutant) in Complex with 8-Oxo-Dgtp at pH 8.0
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8i1a (Na: 6) - Crystal Structure of Human MTH1(G2K Mutant) in Complex with 8-Oxo-Dgtp at pH 8.6
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8i1c (Na: 4) - Crystal Structure of Human MTH1(G2K Mutant) in Complex with 8-Oxo-Dgtp at pH 9.1
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8i1d (Na: 4) - Crystal Structure of Human MTH1(G2K Mutant) in Complex with 2-Oxo-Datp at pH 7.7
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8i1e (Na: 6) - Crystal Structure of Human MTH1(G2K Mutant) in Complex with 2-Oxo-Datp at pH 8.0
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8i1f (Na: 7) - Crystal Structure of Human MTH1(G2K Mutant) in Complex with 2-Oxo-Datp at pH 8.6
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8i1g (Na: 5) - Crystal Structure of Human MTH1(G2K Mutant) in Complex with 2-Oxo-Datp at pH 9.1
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8i1h (Na: 3) - Crystal Structure of Human MTH1(G2K Mutant) in Complex with 2-Oxo-Datp at pH 9.7
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8i1i (Na: 4) - Crystal Structure of Human MTH1(G2K/D120N Mutant) in Complex with 2- Oxo-Datp at pH 7.7
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8i1j (Na: 6) - Crystal Structure of Human MTH1(G2K/D120N Mutant) in Complex with 2- Oxo-Datp at pH 9.7
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8i3z (Na: 4) - Crystal Structure of Nad-II Riboswitch (Two Strands) with Nmn at 1.67 Angstrom
Other atoms:
Br (1);
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8i5g (Na: 1) - Structure of Human NAV1.7 in Complex with Pf-05089771
Other atoms:
F (1);
Cl (2);
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8i5y (Na: 1) - Structure of Human NAV1.7 in Complex with Vixotrigine
Other atoms:
F (1);
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8i61 (Na: 2) - Crystal Structure of Mycobacterium Tuberculosis Uracil-Dna Glycosylase in Complex with Barbituric Acid and Citric Acid, Form I
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8i6b (Na: 1) - Crystal Structure of Mycobacterium Tuberculosis Uracil-Dna Glycosylase in Complex with 5-Hydroxy-2,4(1H,3H)-Pyrimidinedione, Form I
Other atoms:
Cl (3);
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8ica (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Datp (1 Millimolar) and CACL2 (5 Millimolar)
Other atoms:
Ca (1);
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8icb (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Artificial Mother Liquor
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8icc (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna (No 5'-Phosphate)
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8ice (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Datp (1 Millimolar) and CDCL2 (1 Millimolar)
Other atoms:
Cd (2);
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8icf (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Datp (10 Millimolar) and MGCL2 (50 Millimolar)
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8icg (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Datp (1 Millimolar) and MGCL2 (5 Millimolar)
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8ich (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Dctp (1 Millimolar) and MGCL2 (5 Millimolar)
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8ici (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Dgtp (1 Millimolar) and MGCL2 (5 Millimolar)
Other atoms:
Mg (1);
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8icj (Na: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex + Thymidine- 5'-Triphosphate, Soaked in the Presence of Dttp and MGCL2
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8ick (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Datp (1 Millimolar), MGCL2 (5 Millimolar), and MNCL2 (5 Millimolar)
Other atoms:
Mn (2);
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8icl (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Datp (1 Millimolar) and NICL2 (5 Millimolar)
Other atoms:
Ni (2);
Page generated: Fri Jul 28 12:35:44 2023
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