Sodium in PDB, part 273 (files: 10881-10920),
PDB 8f0f-8gpz
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 10881-10920 (PDB 8f0f-8gpz).
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8f0f (Na: 1) - Hiv-1 Wild Type Protease with Grl-110-19A, A Chloroacetamide Derivative Based on Darunavir As P2' Group
Other atoms:
Cl (3);
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8f28 (Na: 1) - Lysozyme Structures From Single-Entity Crystallization Method Nanoac
Other atoms:
Cl (2);
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8f3t (Na: 3) - Crystal Structure of Penicillin Binding Protein 5 (PBP5) T485M T499I V629E Variant Apo Form From Enterococcus Faecium
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8f5t (Na: 8) - Rabbit Muscle Pyruvate Kinase in Complex with Sodium and Magnesium
Other atoms:
Mg (8);
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8fd7 (Na: 1) - Structure of the Human L-Type Voltage-Gated Calcium Channel CAV1.2 Complexed with Gabapentin
Other atoms:
Ca (3);
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8ff6 (Na: 6) - Cytosolic Ascorbate Peroxidase Mutant From Panicum Virgatum
Other atoms:
Fe (6);
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8ff7 (Na: 6) - Cytosolic Ascorbate Peroxidase Mutant From Panicum Virgatum- Ascorbate Complex
Other atoms:
Fe (6);
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8ff9 (Na: 12) - Crystal Structure of Apo Dps Protein (PA0962) From Pseudomonas Aeruginosa (Orthorhombic Form)
Other atoms:
Cl (24);
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8ffe (Na: 3) - Crystal Structure of LRP6 E1E2 Domains Bound to YW210.09 Fab and Engineered XWNT8 Peptide
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8fhj (Na: 1) - Crystal Structure of A Fad Monooxygenease From Methylocystis Sp. Strain SB2
Other atoms:
Br (13);
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8fhl (Na: 1) - Structure of Pyruvate Dehydrogenase Phosphatase Regulatory Subunit Neoepitope Presented By H2-Dd
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8fho (Na: 2) - Cryo-Em Structure of Human Ncc (Class 1)
Other atoms:
F (6);
Cl (2);
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8fhp (Na: 2) - Cryo-Em Structure of Human Ncc (Class 3-1)
Other atoms:
F (6);
Cl (2);
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8fhq (Na: 2) - Cryo-Em Structure of Human Ncc (Class 3-2)
Other atoms:
Cl (2);
F (6);
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8fhr (Na: 2) - Cryo-Em Structure of Human Ncc (Class 3-3)
Other atoms:
Cl (2);
F (6);
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8fht (Na: 2) - Cryo-Em Structure of Human Ncc
Other atoms:
Cl (2);
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8fui (Na: 2) - Hiv-1 Wild Type Protease with Grl-02519A, with N-(2,5-Dimethylphenyl)- 4-(Pyridin-3-Yl)Pyrimidin-2-Amine As P2-P3 Group
Other atoms:
Cl (4);
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8fuj (Na: 1) - Hiv-1 Wild Type Protease with Grl-03419A, with N-(2,5-Dimethylphenyl)- 4-(Pyridin-3-Yl)Pyrimidin-2-Amine As P2-P3 Group and 3,5- Difluorophenylmethyl As the P1 Group
Other atoms:
Cl (4);
F (4);
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8fvw (Na: 1) - Cryoem Structure of E.Coli Transcription Elongation Complex Bound to Ppgpp
Other atoms:
Mg (2);
Zn (2);
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8fwa (Na: 1) - Phycocyanin Structure From A Modular Droplet Injector For Serial Femtosecond Crystallography
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8fwq (Na: 1) - Structure of Kainate Receptor GLUK2 in Complex with the Positive Allosteric Modulator BPAM344
Other atoms:
F (4);
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8fws (Na: 6) - Structure of the Ligand-Binding and Transmembrane Domains of Kainate Receptor GLUK2 in Complex with the Positive Allosteric Modulator BPAM344
Other atoms:
Cl (2);
F (4);
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8fwu (Na: 8) - Structure of the Ligand-Binding and Transmembrane Domains of Kainate Receptor GLUK2 in Complex with the Positive Allosteric Modulator BPAM344 and Competitive Antagonist Dnqx
Other atoms:
F (4);
Cl (2);
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8fww (Na: 7) - Structure of the Ligand-Binding and Transmembrane Domains of Kainate Receptor GLUK2 in Complex with the Positive Allosteric Modulator BPAM344 and Noncompetitive Inhibitor Perampanel
Other atoms:
Cl (2);
F (4);
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8fxq (Na: 1) - The Crystal Sturucture of Rhizopuspepsin with A Bound Modified Peptide Inhibitor Generated By De Novo Drug Design.
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8fyn (Na: 1) - Microed Structure of A2A From Plasma Milled Lamellae
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8g18 (Na: 2) - Heterodimer of the GLUN1B-GLUN2B Nmda Receptor Amino-Terminal Domains Bound to Allosteric Inhibitor 93-108
Other atoms:
F (4);
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8g1y (Na: 5) - Crystal Structure of the Threonine Synthase From Streptococcus Pneumoniae in Complex with Pyridoxal 5-Phosphate.
Other atoms:
Cl (1);
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8g2e (Na: 1) - PKM2 Bound to Compound 2
Other atoms:
Mg (1);
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8g62 (Na: 2) - Papain-Like Protease of Sars Cov-2 in Complex with Remodilin Ncgc 390004
Other atoms:
Cl (6);
Zn (3);
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8gf8 (Na: 2) - Cryo-Em Structure of Human TRPV1 in CNW11 Nanodisc and Soybean Lipids
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8gf9 (Na: 2) - Cryo-Em Structure of Human TRPV1 in CNW11 Nanodisc and Popc:Pope:Popg Lipids
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8gfa (Na: 2) - Cryo-Em Structure of Human TRPV1 in Complex with the Analgesic Drug Sb-366791
Other atoms:
Cl (4);
-
8ghf (Na: 4) - Cryo-Em Structure of HSLO1 in Plasma Membrane Vesicles
Other atoms:
Mg (4);
Ca (8);
-
8gmv (Na: 1) - Crystal Structure of Lysozyme
Other atoms:
Cl (3);
-
8gmw (Na: 1) - Crystal Structure of Lysozyme
Other atoms:
Cl (4);
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8gn9 (Na: 1) - Spfh Domain of Pyrococcus Horikoshii Stomatin
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8gne (Na: 1) - Crystal Structure of Human Adenosine A2A Receptor in Complex with An Insurmountable Inverse Agonist, Kw-6356.
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8gnk (Na: 1) - Cryoem Structure of Cytosol-Facing, Substrate-Bound RATGAT1
Other atoms:
Cl (1);
-
8gpz (Na: 1) - Crystal Structure of BRD4 Bromodomain 1 (BD1) in Complex with C239- 0012
Page generated: Fri Jul 28 12:35:42 2023
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