Sodium in PDB 8b9t: Crystal Structure of Scribble PDZ1 with Human Papillomavirus Strain 16 E6 Peptide

The structure of Crystal Structure of Scribble PDZ1 with Human Papillomavirus Strain 16 E6 Peptide, PDB code: 8b9t was solved by B.Z.Stewart, M.Kvansakul, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	37.23 / 2.50
Space group	P 61 2 2
Cell size a, b, c (Å), α, β, γ (°)	70.611, 70.611, 140.782, 90, 90, 120
R / Rfree (%)	27.4 / 28.1

The binding sites of Sodium atom in the Crystal Structure of Scribble PDZ1 with Human Papillomavirus Strain 16 E6 Peptide (pdb code 8b9t). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Scribble PDZ1 with Human Papillomavirus Strain 16 E6 Peptide, PDB code: 8b9t:

Sodium binding site 1 out of 1 in the Crystal Structure of Scribble PDZ1 with Human Papillomavirus Strain 16 E6 Peptide


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Scribble PDZ1 with Human Papillomavirus Strain 16 E6 Peptide within 5.0Å range: probe atom residue distance (Å) B Occ A:Na1101 b:123.3 occ:1.00 O3S A:EPE1104 2.3 119.6 1.0 O2S A:EPE1105 2.5 153.7 1.0 O A:HOH1201 3.2 110.3 1.0 S A:EPE1105 3.6 152.9 1.0 S A:EPE1104 3.7 147.5 1.0 O1S A:EPE1105 3.7 142.2 1.0 O A:HOH1204 3.8 73.8 1.0 O3S A:EPE1105 4.0 131.3 1.0 O2S A:EPE1104 4.0 125.9 1.0 H101 A:EPE1104 4.2 151.7 1.0 HH11 A:ARG1080 4.3 108.8 1.0 HD3 A:ARG1080 4.5 102.2 1.0 C10 A:EPE1104 4.6 125.5 1.0 O1S A:EPE1104 4.7 97.9 1.0 NH1 A:ARG1080 4.7 89.8 1.0 HH12 A:ARG1080 4.8 108.8 1.0 H62 A:EPE1105 4.8 176.2 1.0 H102 A:EPE1104 4.9 151.7 1.0 H91 A:EPE1105 4.9 177.8 1.0

B.Z.Stewart, S.Caria, P.O.Humbert, M.Kvansakul. Crystal Structure of Scribble PDZ1 with Human Papillomavirus Strain 16 E6 Peptide To Be Published.