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Sodium in PDB, part 268 (files: 10681-10720), PDB 8ad0-8b9z

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 10681-10720 (PDB 8ad0-8b9z).
  1. 8ad0 (Na: 1) - X-Ray Structure of Na+-Nqr From Vibrio Cholerae in Different Conformation at 3.1 A
    Other atoms: Br (1); Fe (4); K (1);
  2. 8ad4 (Na: 4) - X-Ray Structure of Nqrf(129-408)of Vibrio Cholerae in Complex with Nadh
  3. 8ad5 (Na: 2) - X-Ray Structure of Nqrf(129-408)of Vibrio Cholerae Variant F406A
  4. 8aeb (Na: 4) - Sars-Cov-2 Main Protease Complexed with N-(Pyridin-3-Ylmethyl) Thioformamide
  5. 8afu (Na: 2) - Daargc - N-Acetyl-Gamma-Glutamyl-Phosphate Reductase of Denitrovibrio Acetiphilus
  6. 8afv (Na: 4) - DAARGC3 - Engineered Formyl Phosphate Reductase with 3 Substitutions (S178V, G182V, L233I)
  7. 8agq (Na: 5) - Crystal Structure of Anthocyanin-Related GSTF8 From Populus Trichocarpa in Complex with (-)-Catechin and Glutathione
  8. 8aho (Na: 2) - Crystal Structure of the Transpeptidase LDTMT2 From Mycobacterium Tuberculosis in Complex with Cyanamide Analogue 31
    Other atoms: Cl (1);
  9. 8ahq (Na: 1) - Vird/Holo-ACP5B of Streptomyces Virginiae Complex
    Other atoms: Cl (2);
  10. 8ahy (Na: 1) - X-Ray Structure of Human Ncs-1 Bound to Ric-8A
    Other atoms: Mg (1); Ca (2); Cl (1);
  11. 8ai7 (Na: 1) - Structure of Carbamoylated Human Butyrylcholinesterase Upon Reaction with 3-(((2-Cycloheptylethyl)(Methyl)Amino)Methyl)-1H-Indol-7-Yl N,N- Dimethylcarbamate
    Other atoms: Cl (7);
  12. 8aj3 (Na: 1) - X-Ray Structure of Lysozyme Obtained Upon Reaction with [Vivo(Malt)2] (Structure A)
    Other atoms: V (3);
  13. 8alh (Na: 1) - X-Ray Structure of Human Ncs-1 Bound to Ric-8A
    Other atoms: Ca (2); Mg (1); Cl (1);
  14. 8alm (Na: 1) - X-Ray Structure of Human Ncs-1 Bound to Ric-8A
    Other atoms: Ca (2); Cl (1);
  15. 8als (Na: 2) - The Apo-Crystal Structure of A Variant Form of the 28-kDa Schistosoma Haematobium Glutathione Transferase
  16. 8ami (Na: 1) - Crystal Structure of Auguggcau Duplex with Barium Ions (Model 2)
    Other atoms: Ba (2);
  17. 8amv (Na: 1) - Repb PMV158 Hexamer
  18. 8amy (Na: 1) - High-Resolution Crystal Structure of the MU8.1 Conotoxin From Conus Mucronatus
    Other atoms: Zn (1);
  19. 8ate (Na: 2) - Galacturonic Acid Oxidase From Citrus Sinensis
    Other atoms: I (2); Cl (1);
  20. 8awi (Na: 2) - Crystal Structure of Human Transthyretin at 1.15 Angstrom Resolution
  21. 8ax3 (Na: 1) - Structure of Recombinant Human Beta-Glucocerebrosidase in Complex with L-Carbaxylosyl Fluoride
    Other atoms: F (4); Ca (1);
  22. 8b01 (Na: 2) - Cryo-Em Structure of the Tripartite Atp-Independent Periplasmic (Trap) Transporter Siaqm From Photobacterium Profundum in A Nanodisc
  23. 8b2j (Na: 8) - Crystal Structure of Human Sting in Complex with Adu-S100
    Other atoms: Ca (2);
  24. 8b3l (Na: 1) - Hen Egg White Lysozyme 2S in Situ Crystallization
    Other atoms: Cl (2);
  25. 8b3t (Na: 1) - Hen Egg White Lysozyme 4S in Situ Crystallization
    Other atoms: Cl (2);
  26. 8b3u (Na: 1) - Hen Egg White Lysozyme 6S in Situ Crystallization
    Other atoms: Cl (2);
  27. 8b3v (Na: 1) - Hen Egg White Lysozyme 8S in Situ Crystallization
    Other atoms: Cl (2);
  28. 8b45 (Na: 12) - Structure of Cc-Tri with Aib@B,C: Cc-Tri-(Ubuc)4
  29. 8b4f (Na: 3) - Crystal Structure of Human Cathepsin L Forming A Thiohemiacetal with N-Boc-2-Aminoacetaldehyde
  30. 8b4v (Na: 3) - X-Ray Structure of Furin (PCSK3) in Complex with Benzamidine
    Other atoms: Ca (3); Cl (1);
  31. 8b4w (Na: 4) - X-Ray Structure of Furin (PCSK3) in Complex with 1H-Isoindol-3-Amine
    Other atoms: Ca (3); Cl (1);
  32. 8b4x (Na: 4) - X-Ray Structure of Furin (PCSK3) in Complex with Guanidinomethyl-Phac- R-Tle-K-6-(Aminomethyl)-3-Amino-Isoindol
    Other atoms: Ca (3); Cl (1);
  33. 8b5d (Na: 4) - Exploring the Ligand Binding and Conformational Dynamics of Receptor Domain 1 of the Abc Transporter Glnpq
  34. 8b5e (Na: 1) - Exploring the Ligand Binding and Conformational Dynamics of Receptor Domain 1 of the Abc Transporter Glnpq
  35. 8b5m (Na: 1) - Crystal Structure of GH47 Alpha-1,2-Mannosidase From Caulobacter K31 Strain in Complex with Cyclosulfamidate Inhibitor
    Other atoms: Ca (2);
  36. 8b6d (Na: 1) - Crystal Structure of Udp-Glucose Pyrophosphorylase From Thermocrispum Agreste Dsm 44070 in Complex with Udp
  37. 8b6e (Na: 2) - Crystal Structure of the Dna-Binding Short Chromatophore-Targeted Protein Sctp-23166 From Paulinella Chromatophora
  38. 8b8e (Na: 5) - Wild-Type GH11 From Blastobotrys Mokoenaii
  39. 8b9t (Na: 1) - Crystal Structure of Scribble PDZ1 with Human Papillomavirus Strain 16 E6 Peptide
  40. 8b9z (Na: 1) - Drosophila Melanogaster Complex I in the Active State (DM1)
    Other atoms: Fe (28); Zn (1);
Page generated: Sun Dec 15 11:42:45 2024

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