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Sodium in PDB 7x68: CYS179 and CYS504 of CRMP2 Were Covalently Binded By A Sesquiterpene Lactone

Protein crystallography data

The structure of CYS179 and CYS504 of CRMP2 Were Covalently Binded By A Sesquiterpene Lactone, PDB code: 7x68 was solved by S.D.Zhang, Y.F.Ma, J.Zhang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.03 / 1.80
Space group I 41 2 2
Cell size a, b, c (Å), α, β, γ (°) 113.649, 113.649, 196.585, 90, 90, 90
R / Rfree (%) 17.6 / 21.4

Sodium Binding Sites:

The binding sites of Sodium atom in the CYS179 and CYS504 of CRMP2 Were Covalently Binded By A Sesquiterpene Lactone (pdb code 7x68). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the CYS179 and CYS504 of CRMP2 Were Covalently Binded By A Sesquiterpene Lactone, PDB code: 7x68:

Sodium binding site 1 out of 1 in 7x68

Go back to Sodium Binding Sites List in 7x68
Sodium binding site 1 out of 1 in the CYS179 and CYS504 of CRMP2 Were Covalently Binded By A Sesquiterpene Lactone


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of CYS179 and CYS504 of CRMP2 Were Covalently Binded By A Sesquiterpene Lactone within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na601

b:61.8
occ:1.00
OD2 A:ASP476 3.2 36.1 1.0
O A:HOH916 3.3 49.9 1.0
CG A:ASP476 4.1 35.2 1.0
OD1 A:ASP476 4.2 30.6 1.0
NZ A:LYS480 4.5 32.6 1.0
O A:HOH734 4.5 30.5 1.0
CE A:LYS480 4.7 38.9 1.0

Reference:

S.D.Zhang, Y.F.Ma, J.Zhang. CYS179 and CYS504 of CRMP2 Were Covalently Binded By A Sesquiterpene Lactone To Be Published.
Page generated: Wed Oct 9 09:37:17 2024

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