Sodium in PDB, part 266 (files: 10601-10640),
PDB 7zy3-8ad0
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 10601-10640 (PDB 7zy3-8ad0).
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7zy3 (Na: 1) - Room Temperature Structure of Archaerhodopsin-3 Obtained 110 Ns After Photoexcitation
Other atoms:
Ca (1);
Cl (3);
Mg (1);
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7zyi (Na: 2) - Structure of the Human Sodium/Bile Acid Cotransporter (Ntcp) in Complex with Fab and Nanobody
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7zyq (Na: 1) - Crystal Structure of Egfr-T790M/V948R in Complex with Reversible Aminopyrimidine 13
Other atoms:
Cl (2);
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7zzo (Na: 3) - HDAC2 in Complex with An Inhibitor
Other atoms:
Ca (3);
F (3);
Zn (3);
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7zzp (Na: 3) - Structure of HDAC2 Complexed with An Inhibitory Ligand
Other atoms:
Ca (3);
Zn (3);
-
7zzr (Na: 3) - HDAC2 in Complex with Inhibitory Ligand
Other atoms:
Ca (3);
Zn (3);
-
7zzs (Na: 3) - HDAC2 Complexed with An Inhibitory Ligand
Other atoms:
Zn (3);
Cl (3);
Ca (3);
-
7zzt (Na: 3) - Ligand Binding to HDAC2
Other atoms:
Ca (3);
Zn (3);
-
7zzu (Na: 3) - Inhibitory Ligand Binding to HDAC2
Other atoms:
Zn (3);
Ca (3);
-
7zzw (Na: 3) - Ligand Binding to HDAC2
Other atoms:
Zn (3);
Cl (3);
Ca (3);
-
8a0b (Na: 3) - Inhibitor Binding to HDAC2
Other atoms:
Ca (3);
Zn (3);
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8a1f (Na: 2) - Human Ptprk N-Terminal Domains Mam-Ig-FN1
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8a1h (Na: 6) - Bacterial 6-4 Photolyase From Vibrio Cholerase
Other atoms:
Cl (1);
Fe (4);
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8a1k (Na: 1) - Crystal Structure of the Transpeptidase LDTMT2 From Mycobacterium Tuberculosis in Complex with Ebsulfur Analogue 15
Other atoms:
Cl (4);
-
8a1l (Na: 2) - Crystal Structure of the Transpeptidase LDTMT2 From Mycobacterium Tuberculosis in Complex with Alpha-Chloro Ketone 2
Other atoms:
Cl (2);
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8a1m (Na: 3) - Crystal Structure of the Transpeptidase LDTMT2 From Mycobacterium Tuberculosis in Complex with Maleimide Analogue 4
Other atoms:
Cl (4);
F (2);
-
8a1n (Na: 2) - Crystal Structure of the Transpeptidase LDTMT2 From Mycobacterium Tuberculosis in Complex with Fumaryl Amide Analogue 13
Other atoms:
Cl (1);
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8a1o (Na: 1) - Crystal Structure of the Transpeptidase LDTMT2 From Mycobacterium Tuberculosis in Complex with Acrylamide Analogue 8
Other atoms:
Cl (4);
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8a1t (Na: 1) - Sodium Pumping Nadh-Quinone Oxidoreductase
Other atoms:
K (1);
Fe (4);
-
8a1v (Na: 2) - Sodium Pumping Nadh-Quinone Oxidoreductase with Substrate Q2
Other atoms:
Fe (4);
-
8a1w (Na: 2) - Sodium Pumping Nadh-Quinone Oxidoreductase with Substrate Q1
Other atoms:
Fe (4);
-
8a29 (Na: 5) - Apo 1-Deoxy-D-Xylulose 5-Phosphate Synthase From Pseudomonas Aeruginosa
Other atoms:
Mg (13);
Ca (12);
Cl (2);
-
8a35 (Na: 4) - Nak C-Di Mutant with Rb+ and Na+
Other atoms:
Rb (4);
-
8a3g (Na: 1) - X-Ray Crystal Structure of A De Novo Designed Antiparallel Coiled-Coil Homotetramer with 4 Heptad Repeats, Apcc-Tet*
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8a45 (Na: 4) - Structural Analysis of 1-Deoxy-D-Xylulose 5-Phosphate Synthase From Pseudomonas Aeruginosa with 2-Acetyl Thiamine Diphosphate
Other atoms:
Mg (6);
Ca (12);
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8a4d (Na: 5) - 1-Deoxy-D-Xylulose 5-Phosphate Synthase From Pseudomonas Aeruginosa with Thiamine Analog Inhibitor
Other atoms:
Ca (2);
Mg (11);
-
8a4u (Na: 3) - Crystal Structure of Human Cathepsin L with CAA0225
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8a4w (Na: 1) - Crystal Structure of Human Cathepsin L with Covalently Bound Cathepsin L Inhibitor IV
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8a5b (Na: 4) - Crystal Structure of Human Cathepsin L in Complex with Covalently Bound Mg-101
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8a66 (Na: 2) - Crystal Structure of MST2 in Complex with Xmu-Mp-1
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8a67 (Na: 2) - Branched LYS48- and LYS63-Linked Tri-Ubiquitin (K48-K63-UB3) in Complex with Matured Synthetic Nanobody NBSL3.3Q (3RD Generation)
Other atoms:
Cl (1);
Zn (2);
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8a8o (Na: 3) - Paps Reductase From Methanothermococcus Thermolithotrophicus Refined to 1.45 A
Other atoms:
Ca (2);
Fe (16);
-
8a9d (Na: 1) - Multicrystal Room Temperature Structure of Lysozyme Collected Using A Double Multilayer Monochromator.
-
8a9o (Na: 2) - Structure of the Polyamine Acetyltransferase Dpa
Other atoms:
Mg (2);
Br (18);
-
8a9s (Na: 2) - Crystal Structure of CA2+-Discharged Obelin in Complex with Coelenteramine-V
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8ac7 (Na: 9) - Structure of Pseudomonas Aeruginosa Aminopeptidase, Paap
Other atoms:
Zn (8);
-
8ack (Na: 9) - Structure of Pseudomonas Aeruginosa Aminopeptidase, Paap
Other atoms:
As (2);
Zn (10);
-
8acr (Na: 1) - Structure of Pseudomonas Aeruginosa Aminopeptidase, Paap
Other atoms:
Zn (3);
-
8acy (Na: 1) - X-Ray Structure of Na+-Nqr From Vibrio Cholerae at 3.5 A Resolution
Other atoms:
Fe (4);
-
8ad0 (Na: 1) - X-Ray Structure of Na+-Nqr From Vibrio Cholerae in Different Conformation at 3.1 A
Other atoms:
Br (1);
Fe (4);
K (1);
Page generated: Fri Jul 28 12:35:27 2023
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