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Sodium in PDB, part 266 (files: 10601-10640), PDB 7zst-8a4w

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 10601-10640 (PDB 7zst-8a4w).
  1. 7zst (Na: 1) - Crystal Structure of Truncated Aspartate Transcarbamoylase From Plasmodium Falciparum in Complex with Fla-01
  2. 7ztb (Na: 2) - Structure of the Salmonella Trna Pyrophosphokinase Caprel
    Other atoms: Cl (1);
  3. 7ztf (Na: 1) - Penicillium Expansum Antifungal Protein B
    Other atoms: Cl (3);
  4. 7ztl (Na: 1) - Crystal Structure of A Covalently Linked Aurora-A N-Myc Complex
    Other atoms: Mg (2);
  5. 7ztw (Na: 2) - Crystal Structure of Human Parechovirus 1 2A Protein
  6. 7zuo (Na: 1) - Crystal Structure of Ljungan Virus 4 2A2 Protein, P212121 Form
  7. 7zvf (Na: 2) - Crystal Structure of Human Cathepsin L in Complex with Covalently Bound CLIK148
  8. 7zwg (Na: 1) - The Crystal Structure of RO4493940 Bound to CK2ALPHA
  9. 7zx4 (Na: 1) - Clathrin N-Terminal Domain in Complex with A Hurp Phospho-Peptide
    Other atoms: Cl (1);
  10. 7zy3 (Na: 1) - Room Temperature Structure of Archaerhodopsin-3 Obtained 110 Ns After Photoexcitation
    Other atoms: Ca (1); Cl (3); Mg (1);
  11. 7zyi (Na: 2) - Structure of the Human Sodium/Bile Acid Cotransporter (Ntcp) in Complex with Fab and Nanobody
  12. 7zyq (Na: 1) - Crystal Structure of Egfr-T790M/V948R in Complex with Reversible Aminopyrimidine 13
    Other atoms: Cl (2);
  13. 7zzo (Na: 3) - HDAC2 in Complex with An Inhibitor
    Other atoms: Ca (3); F (3); Zn (3);
  14. 7zzp (Na: 3) - Structure of HDAC2 Complexed with An Inhibitory Ligand
    Other atoms: Ca (3); Zn (3);
  15. 7zzr (Na: 3) - HDAC2 in Complex with Inhibitory Ligand
    Other atoms: Ca (3); Zn (3);
  16. 7zzs (Na: 3) - HDAC2 Complexed with An Inhibitory Ligand
    Other atoms: Zn (3); Cl (3); Ca (3);
  17. 7zzt (Na: 3) - Ligand Binding to HDAC2
    Other atoms: Ca (3); Zn (3);
  18. 7zzu (Na: 3) - Inhibitory Ligand Binding to HDAC2
    Other atoms: Zn (3); Ca (3);
  19. 7zzw (Na: 3) - Ligand Binding to HDAC2
    Other atoms: Zn (3); Cl (3); Ca (3);
  20. 8a0b (Na: 3) - Inhibitor Binding to HDAC2
    Other atoms: Ca (3); Zn (3);
  21. 8a1f (Na: 2) - Human Ptprk N-Terminal Domains Mam-Ig-FN1
  22. 8a1h (Na: 6) - Bacterial 6-4 Photolyase From Vibrio Cholerase
    Other atoms: Cl (1); Fe (4);
  23. 8a1k (Na: 1) - Crystal Structure of the Transpeptidase LDTMT2 From Mycobacterium Tuberculosis in Complex with Ebsulfur Analogue 15
    Other atoms: Cl (4);
  24. 8a1l (Na: 2) - Crystal Structure of the Transpeptidase LDTMT2 From Mycobacterium Tuberculosis in Complex with Alpha-Chloro Ketone 2
    Other atoms: Cl (2);
  25. 8a1m (Na: 3) - Crystal Structure of the Transpeptidase LDTMT2 From Mycobacterium Tuberculosis in Complex with Maleimide Analogue 4
    Other atoms: Cl (4); F (2);
  26. 8a1n (Na: 2) - Crystal Structure of the Transpeptidase LDTMT2 From Mycobacterium Tuberculosis in Complex with Fumaryl Amide Analogue 13
    Other atoms: Cl (1);
  27. 8a1o (Na: 1) - Crystal Structure of the Transpeptidase LDTMT2 From Mycobacterium Tuberculosis in Complex with Acrylamide Analogue 8
    Other atoms: Cl (4);
  28. 8a1t (Na: 1) - Sodium Pumping Nadh-Quinone Oxidoreductase
    Other atoms: K (1); Fe (4);
  29. 8a1u (Na: 2) - Sodium Pumping Nadh-Quinone Oxidoreductase with Substrates Nadh and Q2
    Other atoms: Fe (4);
  30. 8a1v (Na: 2) - Sodium Pumping Nadh-Quinone Oxidoreductase with Substrate Q2
    Other atoms: Fe (4);
  31. 8a1w (Na: 2) - Sodium Pumping Nadh-Quinone Oxidoreductase with Substrate Q1
    Other atoms: Fe (4);
  32. 8a29 (Na: 5) - Apo 1-Deoxy-D-Xylulose 5-Phosphate Synthase From Pseudomonas Aeruginosa
    Other atoms: Mg (13); Ca (12); Cl (2);
  33. 8a2o (Na: 1) - Room-Temperature Structure of the Stabilised A2A-Theophylline Complex Determined By Synchrotron Serial Crystallography
  34. 8a2p (Na: 1) - Room-Temperature Structure of the Stabilised A2A-LUAA47070 Complex Determined By Synchrotron Serial Crystallography
    Other atoms: F (2);
  35. 8a35 (Na: 4) - Nak C-Di Mutant with Rb+ and Na+
    Other atoms: Rb (4);
  36. 8a3g (Na: 1) - X-Ray Crystal Structure of A De Novo Designed Antiparallel Coiled-Coil Homotetramer with 4 Heptad Repeats, Apcc-Tet*
  37. 8a45 (Na: 4) - Structural Analysis of 1-Deoxy-D-Xylulose 5-Phosphate Synthase From Pseudomonas Aeruginosa with 2-Acetyl Thiamine Diphosphate
    Other atoms: Mg (6); Ca (12);
  38. 8a4d (Na: 5) - 1-Deoxy-D-Xylulose 5-Phosphate Synthase From Pseudomonas Aeruginosa with Thiamine Analog Inhibitor
    Other atoms: Ca (2); Mg (11);
  39. 8a4u (Na: 3) - Crystal Structure of Human Cathepsin L with CAA0225
  40. 8a4w (Na: 1) - Crystal Structure of Human Cathepsin L with Covalently Bound Cathepsin L Inhibitor IV
Page generated: Thu Dec 28 11:31:58 2023

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