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Sodium in PDB 7vpe: Falcilysin in Complex with A1

Protein crystallography data

The structure of Falcilysin in Complex with A1, PDB code: 7vpe was solved by J.Q.Lin, A.El Sahili, J.Lescar, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.92 / 1.62
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 93.663, 106.157, 126.122, 90, 90, 90
R / Rfree (%) 18 / 19.6

Other elements in 7vpe:

The structure of Falcilysin in Complex with A1 also contains other interesting chemical elements:

Chlorine (Cl) 6 atoms
Zinc (Zn) 1 atom

Sodium Binding Sites:

The binding sites of Sodium atom in the Falcilysin in Complex with A1 (pdb code 7vpe). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Falcilysin in Complex with A1, PDB code: 7vpe:

Sodium binding site 1 out of 1 in 7vpe

Go back to Sodium Binding Sites List in 7vpe
Sodium binding site 1 out of 1 in the Falcilysin in Complex with A1


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Falcilysin in Complex with A1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na1210

b:37.7
occ:1.00
ND2 A:ASN1177 3.4 22.5 1.0
O A:HOH1728 3.6 34.3 1.0
CB A:ASN1177 4.2 23.1 1.0
CG A:ASN1177 4.3 23.4 1.0
CA A:GLU1174 4.3 27.3 1.0
CG A:GLU1174 4.4 34.2 1.0
CE A:LYS1173 4.7 35.5 1.0
O A:LYS1173 4.8 25.5 1.0
CB A:GLU1174 4.8 28.8 1.0
CG A:LYS1173 4.9 29.0 1.0
N A:GLU1174 4.9 26.0 1.0
OE2 A:GLU1174 4.9 37.9 1.0

Reference:

J.Q.Lin, J.Lescar. Title Is Not Available Yet As We Are Preparing the Manuscript. Will Update Again Once the Paper Is Out. To Be Published.
Page generated: Fri Apr 7 16:52:43 2023

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