Sodium in PDB, part 256 (files: 10201-10240),
PDB 7riz-7s2c
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 10201-10240 (PDB 7riz-7s2c).
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7riz (Na: 1) - Crystal Structure of RPA3624, A Beta-Propeller Lactonase From Rhodopseudomonas Palustris, with Active-Site Bound 2-Hydroxyquinoline
Other atoms:
Ca (1);
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7rj9 (Na: 2) - Crystal Structure of the Vitronectin Hemopexin-Like Domain Binding Calcium
Other atoms:
Cl (2);
Ca (2);
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7rji (Na: 1) - Bthtx-II Variant B, From Bothrops Jararacussu Venom, Complexed with Stearic Acid
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7rjo (Na: 1) - Crystal Structure of Human Bromodomain Containing Protein 4 (BRD4) in Complex with Hnrnpk
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7rjp (Na: 8) - Crystal Structure of Human Bromodomain Containing Protein 4 (BRD4) in Complex with Shmt
Other atoms:
Cl (4);
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7rjq (Na: 5) - Crystal Structure of Human Bromodomain Containing Protein 4 (BRD4) in Complex with ILF3
Other atoms:
Cl (3);
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7rjr (Na: 1) - Crystal Structure of Human Bromodomain Containing Protein 4 (BRD4) in Complex with BCLTF1
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7rlr (Na: 2) - Crystal Structure of K83A Mutant of Class D Beta-Lactamase From Clostridium Difficile 630
Other atoms:
Cl (7);
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7rm3 (Na: 2) - Antibody 2E10.E9 in Complex with P. Vivax Csp Peptide Angagnqpgangagnqpgangaggqaa
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7rm5 (Na: 1) - Microed Structure of the Human Adenosine Receptor at 2.8A
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7rma (Na: 1) - Structure of the Fourth Uim (Ubiquitin Interacting Motif) of ANKRD13D in Complex with A High Affinity Ubv (Ubiquitin Variant)
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7rnp (Na: 4) - Engineered Tryptophan Synthase B-Subunit From Pyrococcus Furiosus, PFTRPB2B9_H275E with 4-Cl-Trp Non-Covalently Bound
Other atoms:
Cl (2);
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7rnq (Na: 4) - Holo Structure of Engineered Trpb, 2B9-H275E, From Pyrococcus Furiosus in the Extended-Open Conformation
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7rof (Na: 4) - Engineered Tryptophan Synthase B-Subunit From Pyrococcus Furiosus, PFTRPB2B9-H275E with L-Trp Non-Covalently Bound
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7roj (Na: 1) - Amyloid-Related Segment of Alphab-Crystallin Residues 90-100 with G95W Mutation
Other atoms:
F (12);
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7roo (Na: 1) - Crystal Structure of Friedel-Crafts Alkylating Enzyme Cylk From Cylindospermum Licheniforme with Bromide
Other atoms:
Mg (2);
Ca (10);
Br (4);
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7rph (Na: 3) - Cryo-Em Structure of Murine Dispatched 'R' Conformation
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7rpi (Na: 2) - Cryo-Em Structure of Murine Dispatched 'T' Conformation
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7rpk (Na: 2) - Cryo-Em Structure of Murine Dispatched in Complex with Sonic Hedgehog
Other atoms:
Ca (2);
Zn (1);
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7rqu (Na: 2) - Cryo-Em Structure of the Full-Length TRPV1 with Rtx at 4 Degrees Celsius, in A Closed State, Class I
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7rqv (Na: 2) - Cryo-Em Structure of the Full-Length TRPV1 with Rtx at 4 Degrees Celsius, in An Intermediate-Closed State, Class II
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7rqx (Na: 2) - Cryo-Em Structure of the Full-Length TRPV1 with Rtx at 25 Degrees Celsius, in An Intermediate-Open State, Class A
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7rrp (Na: 72) - Apoferritin Structure at 1.27 Angstrom Resolution Determined From A 300 Kv Titan Krios G3I Electron Microscope with FALCON4 Detector
Other atoms:
Zn (206);
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7rsj (Na: 3) - Structure of the VPS34 Kinase Domain with Compound 14
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7rsv (Na: 5) - Structure of the VPS34 Kinase Domain with Compound 5
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7rtm (Na: 2) - Cryo-Em Structure of the Sodium-Driven Chloride/Bicarbonate Exchanger Ndcbe (SLC4A8)
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7rtr (Na: 4) - Ylq-SG3 Tcr in Complex with Sars-Cov-2 Spike-Derived Peptide S269-277 (Ylqprtfll) Presented By Hla-A*02:01
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7rva (Na: 1) - Updated Crystal Structure of Replication Initiator Protein REPE54.
Other atoms:
Mg (2);
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7rvi (Na: 1) - Segment From Naked Mole Rat (Elk T174S) Prion Protein 168-176 Qynnqnsfv
Other atoms:
As (1);
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7rxv (Na: 2) - Human Methionine Adenosyltransferase 2A Bound to Methylthioadenosine, Malonate (Mla) and MGF3
Other atoms:
F (3);
K (1);
Mg (2);
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7rxx (Na: 4) - Human Methionine Adenosyltransferase 2A Bound to Methylthioadenosine and Two Sulfate in the Active Site
Other atoms:
Mg (2);
K (1);
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7rzd (Na: 1) - Crystal Structure of Hla-B*07:02 in Complex with Mll(747-755) Peptide
Other atoms:
Cl (1);
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7s0u (Na: 1) - PRMT5/MEP50 Crystal Structure with Mta and Phthalazinone Fragment Bound
Other atoms:
Cl (1);
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7s16 (Na: 1) - Crystal Structure of Alpha-Cop-WD40 Domain R57A Mutant
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7s27 (Na: 1) - Crystal Structure of Hen Egg White Lysozyme
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7s28 (Na: 1) - Crystal Structure of Hen Egg White Lysozyme
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7s29 (Na: 1) - Crystal Structure of Hen Egg White Lysozyme
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7s2a (Na: 1) - Crystal Structure of Hen Egg White Lysozyme
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7s2b (Na: 1) - Crystal Structure of Hen Egg White Lysozyme
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7s2c (Na: 1) - Crystal Structure of Hen Egg White Lysozyme
Page generated: Fri Jul 28 12:35:04 2023
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