Sodium in PDB, part 253 (files: 10081-10120),
PDB 7p8p-7q1k
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 10081-10120 (PDB 7p8p-7q1k).
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7p8p (Na: 3) - Crystal Structure of Fhit Covalently Bound to A Nucleotide
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7p8z (Na: 2) - Short Wilavidin Biotin Complex
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7p9q (Na: 6) - Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn.
Other atoms:
Mn (6);
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7pcm (Na: 1) - Burg (Holo) in Complex with (Z)-2,3-Dihydroxy-6-Methyl-Hept-2-Enoate (13): Biosynthesis of Cyclopropanol Rings in Bacterial Toxins
Other atoms:
Mg (4);
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7pco (Na: 1) - Burg E232Q Mutant (Holo) in Complex with 2R,3R-2,3-Dihydroxy-6-Methyl- Heptanoate (12): Biosynthesis of Cyclopropanol Rings in Bacterial Toxins
Other atoms:
Mg (4);
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7pda (Na: 1) - Crystal Structure of Phenazine 1-Carboxylic Acid Decarboxylase From Mycobacterium Fortuitum
Other atoms:
Mn (1);
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7pek (Na: 2) - Crystal Structure of Triosephosphate Isomerase C216A Mutant From Schizosaccharomyces Pombe (Sptim C216A)
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7pen (Na: 2) - Crystal Structure of Two-Domain Laccase Mutant Y230A From Streptomyces Griseoflavus
Other atoms:
Cu (24);
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7pes (Na: 4) - Crystal Structure of Two-Domain Laccase Mutant M199G From Streptomyces Griseoflavus
Other atoms:
Cu (24);
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7pf7 (Na: 3) - Apo Structure of Synftn Variant D65A
Other atoms:
Cl (1);
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7pf8 (Na: 4) - Synftn Variant E141A
Other atoms:
Cl (2);
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7pf9 (Na: 1) - Synftn Variant E141D
Other atoms:
Cl (3);
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7pfg (Na: 1) - 2 Minute FE2+ Soaked Structure of Synftn Variant E141A
Other atoms:
Fe (2);
Cl (1);
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7pfi (Na: 1) - 20 Minute FE2+ Soaked Structure of Synftn Variant D65A
Other atoms:
Fe (3);
Cl (1);
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7pfj (Na: 2) - 20 Minute FE2+ Soaked Structure of Synftn Variant E141A
Other atoms:
Cl (2);
Fe (3);
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7pfl (Na: 1) - The Sars-COV2 Major Protease (Mpro) Apo Structure to 1.8 A Resolution
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7pfr (Na: 2) - Crystal Structure of Two-Domain Laccase Mutant M199A From Streptomyces Griseoflavus
Other atoms:
Cu (24);
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7pg6 (Na: 1) - Crystal Structure of PI3KALPHA in Complex with the Inhibitor Nvp- BYL719
Other atoms:
F (3);
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7pgi (Na: 4) - NAVAB1P (Bicelles)
Other atoms:
Mg (1);
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7phx (Na: 1) - Tsetse Thrombin Inhibitor in Complex with Human Alpha-Thrombin - Acid- Stable Sulfotyrosine Analogue
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7phz (Na: 2) - Crystal Structure of X77 Bound to the Main Protease (3CLPRO/Mpro) of Sars-Cov-2 in Spacegroup P2(1)2(1)2(1).
Other atoms:
Cl (2);
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7pi0 (Na: 2) - Unstacked Compact Dunaliella Psii
Other atoms:
Ca (2);
Fe (4);
Mg (202);
Mn (8);
Cl (4);
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7po6 (Na: 1) - Xist (M6A)Ucg Tetraloop Rna Bound to the Yth Domain of YTHDC1
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7pob (Na: 1) - An Irreversible, Promiscuous and Highly Thermostable Claisen- Condensation Biocatalyst Drives the Synthesis of Substituted Pyrroles
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7pqs (Na: 1) - SRPK1 in Complex with MSC2711186
Other atoms:
F (2);
Cl (4);
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7pu0 (Na: 2) - Crystal Structure of Two-Domain Laccase Mutant H165A/M199G From Streptomyces Griseoflavus
Other atoms:
Cu (24);
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7puf (Na: 2) - Urate Oxidase Azaxanthine Complex Under 600 Bar (60 Mpa) of Argon
Other atoms:
Ar (4);
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7pux (Na: 1) - Structure of P97 N-D1(L198W) in Complex with Fragment TROLL2
Other atoms:
Br (1);
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7pv5 (Na: 16) - Rbd Domain of D. Melanogaster Trna (Uracil-5-)-Methyltransferase Homolog A (TRMT2A)
Other atoms:
Cl (46);
Au (4);
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7pvj (Na: 1) - Crystal Structure of Thioredoxin Reductase From Brugia Malayi in Complex with Auranofin
Other atoms:
Au (1);
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7pvs (Na: 1) - Crystal Structure of the Abl SH3 Domain V73E-A74S-S75R-G76T-D77E-G92N- Y93N-N94T-H95E Mutant in Presence of Peg 200
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7pw1 (Na: 4) - Crystal Structure of Ancestral Haloalkane Dehalogenase Anclinb-Dmba
Other atoms:
Cl (1);
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7pwn (Na: 2) - Urate Oxydase Aza-Xanthine Complex at 1000 Bars (100 Mpa) of Argon
Other atoms:
Ar (4);
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7q09 (Na: 2) - Urate Oxidase Aza-Xanthine Complex Under 1500 Bar of Argon
Other atoms:
Ar (6);
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7q0e (Na: 4) - Human Carbonic Anhydrase II in Complex with Methyl 2- (Benzenesulfonyl)-4-Chloro-5-Sulfamoylbenzoate
Other atoms:
Zn (1);
Cl (1);
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7q0t (Na: 1) - Lysozyme Soaked with V(IV)OSO4
Other atoms:
Cl (4);
V (3);
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7q0u (Na: 1) - Lysozyme Soaked with V(IV)OSO4 and Bipy
Other atoms:
Cl (5);
V (1);
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7q0v (Na: 1) - Lysozyme Soaked with V(IV)OSO4 and Phen
Other atoms:
V (4);
Cl (6);
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7q1d (Na: 3) - Acetyltrasferase(3) Type Iiia in Complex with 3-N-Methyl-Nemycin B
Other atoms:
Cl (1);
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7q1k (Na: 1) - Crystal Structure of the Native AA9A Lpmo From Thermoascus Aurantiacus
Other atoms:
Cu (1);
Page generated: Thu Dec 28 11:30:43 2023
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