Atomistry » Sodium » PDB 7p8p-7q1k
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Sodium in PDB, part 253 (files: 10081-10120), PDB 7p8p-7q1k

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 10081-10120 (PDB 7p8p-7q1k).
  1. 7p8p (Na: 3) - Crystal Structure of Fhit Covalently Bound to A Nucleotide
  2. 7p8z (Na: 2) - Short Wilavidin Biotin Complex
  3. 7p9q (Na: 6) - Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn.
    Other atoms: Mn (6);
  4. 7pcm (Na: 1) - Burg (Holo) in Complex with (Z)-2,3-Dihydroxy-6-Methyl-Hept-2-Enoate (13): Biosynthesis of Cyclopropanol Rings in Bacterial Toxins
    Other atoms: Mg (4);
  5. 7pco (Na: 1) - Burg E232Q Mutant (Holo) in Complex with 2R,3R-2,3-Dihydroxy-6-Methyl- Heptanoate (12): Biosynthesis of Cyclopropanol Rings in Bacterial Toxins
    Other atoms: Mg (4);
  6. 7pda (Na: 1) - Crystal Structure of Phenazine 1-Carboxylic Acid Decarboxylase From Mycobacterium Fortuitum
    Other atoms: Mn (1);
  7. 7pek (Na: 2) - Crystal Structure of Triosephosphate Isomerase C216A Mutant From Schizosaccharomyces Pombe (Sptim C216A)
  8. 7pen (Na: 2) - Crystal Structure of Two-Domain Laccase Mutant Y230A From Streptomyces Griseoflavus
    Other atoms: Cu (24);
  9. 7pes (Na: 4) - Crystal Structure of Two-Domain Laccase Mutant M199G From Streptomyces Griseoflavus
    Other atoms: Cu (24);
  10. 7pf7 (Na: 3) - Apo Structure of Synftn Variant D65A
    Other atoms: Cl (1);
  11. 7pf8 (Na: 4) - Synftn Variant E141A
    Other atoms: Cl (2);
  12. 7pf9 (Na: 1) - Synftn Variant E141D
    Other atoms: Cl (3);
  13. 7pfg (Na: 1) - 2 Minute FE2+ Soaked Structure of Synftn Variant E141A
    Other atoms: Fe (2); Cl (1);
  14. 7pfi (Na: 1) - 20 Minute FE2+ Soaked Structure of Synftn Variant D65A
    Other atoms: Fe (3); Cl (1);
  15. 7pfj (Na: 2) - 20 Minute FE2+ Soaked Structure of Synftn Variant E141A
    Other atoms: Cl (2); Fe (3);
  16. 7pfl (Na: 1) - The Sars-COV2 Major Protease (Mpro) Apo Structure to 1.8 A Resolution
  17. 7pfr (Na: 2) - Crystal Structure of Two-Domain Laccase Mutant M199A From Streptomyces Griseoflavus
    Other atoms: Cu (24);
  18. 7pg6 (Na: 1) - Crystal Structure of PI3KALPHA in Complex with the Inhibitor Nvp- BYL719
    Other atoms: F (3);
  19. 7pgi (Na: 4) - NAVAB1P (Bicelles)
    Other atoms: Mg (1);
  20. 7phx (Na: 1) - Tsetse Thrombin Inhibitor in Complex with Human Alpha-Thrombin - Acid- Stable Sulfotyrosine Analogue
  21. 7phz (Na: 2) - Crystal Structure of X77 Bound to the Main Protease (3CLPRO/Mpro) of Sars-Cov-2 in Spacegroup P2(1)2(1)2(1).
    Other atoms: Cl (2);
  22. 7pi0 (Na: 2) - Unstacked Compact Dunaliella Psii
    Other atoms: Ca (2); Fe (4); Mg (202); Mn (8); Cl (4);
  23. 7po6 (Na: 1) - Xist (M6A)Ucg Tetraloop Rna Bound to the Yth Domain of YTHDC1
  24. 7pob (Na: 1) - An Irreversible, Promiscuous and Highly Thermostable Claisen- Condensation Biocatalyst Drives the Synthesis of Substituted Pyrroles
  25. 7pqs (Na: 1) - SRPK1 in Complex with MSC2711186
    Other atoms: F (2); Cl (4);
  26. 7pu0 (Na: 2) - Crystal Structure of Two-Domain Laccase Mutant H165A/M199G From Streptomyces Griseoflavus
    Other atoms: Cu (24);
  27. 7puf (Na: 2) - Urate Oxidase Azaxanthine Complex Under 600 Bar (60 Mpa) of Argon
    Other atoms: Ar (4);
  28. 7pux (Na: 1) - Structure of P97 N-D1(L198W) in Complex with Fragment TROLL2
    Other atoms: Br (1);
  29. 7pv5 (Na: 16) - Rbd Domain of D. Melanogaster Trna (Uracil-5-)-Methyltransferase Homolog A (TRMT2A)
    Other atoms: Cl (46); Au (4);
  30. 7pvj (Na: 1) - Crystal Structure of Thioredoxin Reductase From Brugia Malayi in Complex with Auranofin
    Other atoms: Au (1);
  31. 7pvs (Na: 1) - Crystal Structure of the Abl SH3 Domain V73E-A74S-S75R-G76T-D77E-G92N- Y93N-N94T-H95E Mutant in Presence of Peg 200
  32. 7pw1 (Na: 4) - Crystal Structure of Ancestral Haloalkane Dehalogenase Anclinb-Dmba
    Other atoms: Cl (1);
  33. 7pwn (Na: 2) - Urate Oxydase Aza-Xanthine Complex at 1000 Bars (100 Mpa) of Argon
    Other atoms: Ar (4);
  34. 7q09 (Na: 2) - Urate Oxidase Aza-Xanthine Complex Under 1500 Bar of Argon
    Other atoms: Ar (6);
  35. 7q0e (Na: 4) - Human Carbonic Anhydrase II in Complex with Methyl 2- (Benzenesulfonyl)-4-Chloro-5-Sulfamoylbenzoate
    Other atoms: Zn (1); Cl (1);
  36. 7q0t (Na: 1) - Lysozyme Soaked with V(IV)OSO4
    Other atoms: Cl (4); V (3);
  37. 7q0u (Na: 1) - Lysozyme Soaked with V(IV)OSO4 and Bipy
    Other atoms: Cl (5); V (1);
  38. 7q0v (Na: 1) - Lysozyme Soaked with V(IV)OSO4 and Phen
    Other atoms: V (4); Cl (6);
  39. 7q1d (Na: 3) - Acetyltrasferase(3) Type Iiia in Complex with 3-N-Methyl-Nemycin B
    Other atoms: Cl (1);
  40. 7q1k (Na: 1) - Crystal Structure of the Native AA9A Lpmo From Thermoascus Aurantiacus
    Other atoms: Cu (1);
Page generated: Thu Dec 28 11:30:43 2023

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