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PDB 7opz-7pfg »
7p9q »
Sodium in PDB 7p9q: Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn.
Protein crystallography data
The structure of Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn., PDB code: 7p9q
was solved by
D.Gahloth,
D.Leys,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 43.42 / 2.53 |
| Space group | P 1 21 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 104.2, 195.45, 105.21, 90, 116.35, 90 |
| R / Rfree (%) | 18.4 / 22.1 |
Other elements in 7p9q:
The structure of Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn. also contains other interesting chemical elements:
| Manganese | (Mn) | 6 atoms |
Sodium Binding Sites:
The binding sites of Sodium atom in the Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn.
(pdb code 7p9q). This binding sites where shown within
5.0 Angstroms radius around Sodium atom.
In total 6 binding sites of Sodium where determined in the Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn., PDB code: 7p9q:
Jump to Sodium binding site number: 1; 2; 3; 4; 5; 6;
In total 6 binding sites of Sodium where determined in the Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn., PDB code: 7p9q:
Jump to Sodium binding site number: 1; 2; 3; 4; 5; 6;
Sodium binding site 1 out of 6 in 7p9q
Go back to
Sodium Binding Sites List in 7p9q
Sodium binding site 1 out
of 6 in the Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn.
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 1 of Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn. within 5.0Å range:
|
Sodium binding site 2 out of 6 in 7p9q
Go back to
Sodium Binding Sites List in 7p9q
Sodium binding site 2 out
of 6 in the Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn.
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 2 of Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn. within 5.0Å range:
|
Sodium binding site 3 out of 6 in 7p9q
Go back to
Sodium Binding Sites List in 7p9q
Sodium binding site 3 out
of 6 in the Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn.
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 3 of Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn. within 5.0Å range:
|
Sodium binding site 4 out of 6 in 7p9q
Go back to
Sodium Binding Sites List in 7p9q
Sodium binding site 4 out
of 6 in the Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn.
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 4 of Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn. within 5.0Å range:
|
Sodium binding site 5 out of 6 in 7p9q
Go back to
Sodium Binding Sites List in 7p9q
Sodium binding site 5 out
of 6 in the Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn.
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 5 of Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn. within 5.0Å range:
|
Sodium binding site 6 out of 6 in 7p9q
Go back to
Sodium Binding Sites List in 7p9q
Sodium binding site 6 out
of 6 in the Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn.
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 6 of Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn. within 5.0Å range:
|
Reference:
D.Gahloth,
K.Fisher,
K.A.P.Payne,
M.Cliff,
C.Levy,
D.Leys.
Structural and Biochemical Characterization of the Prenylated Flavin Mononucleotide-Dependent Indole-3-Carboxylic Acid Decarboxylase. J.Biol.Chem. V. 298 01771 2022.
ISSN: ESSN 1083-351X
PubMed: 35218772
DOI: 10.1016/J.JBC.2022.101771
Page generated: Tue Oct 8 18:28:24 2024
ISSN: ESSN 1083-351X
PubMed: 35218772
DOI: 10.1016/J.JBC.2022.101771
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