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Sodium in PDB, part 201 (files: 8001-8040), PDB 6h7l-6hlj

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 8001-8040 (PDB 6h7l-6hlj).
  1. 6h7l (Na: 2) - Activated Turkey BETA1 Adrenoceptor with Bound Partial Agonist Dobutamine and Nanobody NB6B9
  2. 6h7m (Na: 2) - Activated Turkey BETA1 Adrenoceptor with Bound Partial Agonist Salbutamol and Nanobody NB6B9
  3. 6h7n (Na: 2) - Activated Turkey BETA1 Adrenoceptor with Bound Partial Agonist Xamoterol and Nanobody NB6B9
  4. 6h7o (Na: 2) - Activated Turkey BETA1 Adrenoceptor with Bound Weak Partial Agonist Cyanopindolol and Nanobody NB6B9
  5. 6h83 (Na: 1) - Mamm Ctd D249H - Copper Form
    Other atoms: Cu (1);
  6. 6h8t (Na: 1) - Crystal Structure of Papain Modify By Achiral Ru(II)Complex
    Other atoms: Ru (2); Cl (3);
  7. 6h9a (Na: 1) - Crystal Structure of Anaerobic Ergothioneine Biosynthesis Enzyme From Chlorobium Limicola in Complex with Natural Substrate Trimethyl Histidine.
    Other atoms: Cl (3);
  8. 6h9u (Na: 1) - Crystal Structure of the Bip Nbd and Manf Sap Complex
  9. 6ha3 (Na: 1) - Human Transketolase Variant E160Q in Covalent Complex with Donor Ketose D-Fructose-6-Phosphate
    Other atoms: Mg (1); Ca (1);
  10. 6hac (Na: 1) - Crystal Structure of [Fe]-Hydrogenase (Hmd) Holoenzyme From Methanococcus Aeolicus (Open Form)
    Other atoms: Fe (1);
  11. 6had (Na: 1) - Human Transketolase Variant E160Q
    Other atoms: Mg (1); Ca (1);
  12. 6hae (Na: 2) - Crystal Structure of [Fe]-Hydrogenase (Hmd) From Methanococcus Aeolicus in Complex with Fegp Cofactor and Methenyl- Tetrahydromethanopterin (Close Form B)
    Other atoms: K (4); Fe (2); Cl (2);
  13. 6hah (Na: 1) - Crystal Structure of Paf - P-Sulfonatocalix[6]Arene Complex
  14. 6hav (Na: 2) - Crystal Structure of [Fe]-Hydrogenase (Hmd) From Methanococcus Aeolicus in Complex with Fegp and Methenyl-Tetrahydromethanopterin (Close Form A) at 1.06 A Resolution
    Other atoms: Fe (1);
  15. 6hbn (Na: 3) - High-Salt Structure of Protein Kinase CK2 Catalytic Subunit (Isoform CK2ALPHA/CSKN2A1 Gene Product) in Complex with the Indenoindole-Type Inhibitor THN27
    Other atoms: Cl (10);
  16. 6hbx (Na: 2) - The Structure of the G. Violaceus Guanidine II Riboswitch P2 Stem-Loop with Ethylguanidine
    Other atoms: Br (1);
  17. 6hc5 (Na: 3) - The Structure of the G. Violaceus Guanidine II Riboswitch P2 Stem-Loop with Audouine
    Other atoms: Br (1);
  18. 6hck (Na: 2) - The Transcriptional Regulator Prfa From Listeria Monocytogenes in Complex with Dipeptide Leu-Leu
  19. 6hct (Na: 4) - Crystal Structure of Archeoglobus Fulgidus L7AE Bound to Its Cognate Utr K-Turn
  20. 6hdp (Na: 1) - Human DYRK2 Bound to Scorzodihydrostilbene A
  21. 6hdz (Na: 2) - Pseudomonas Aeruginosa Seryl-Trna Synthetase in Complex with 5'-O-(N- (L-Seryl)-Sulfamoyl)Uridine
  22. 6he1 (Na: 2) - Pseudomonas Aeruginosa Seryl-Trna Synthetase in Complex with 5'-O-(N- (L-Seryl)-Sulfamoyl)N3-Methyluridine
  23. 6he3 (Na: 2) - Pseudomonas Aeruginosa Seryl-Trna Synthetase in Complex with 5'-O-(N- (L-Seryl)-Sulfamoyl)Cytidine
  24. 6hem (Na: 1) - Structure of the C-Terminal Domain of USP25 (748-1048)
  25. 6hhd (Na: 1) - Mouse Prion Protein in Complex with Nanobody 484
    Other atoms: Cl (3);
  26. 6hip (Na: 1) - Structure of SPF45 Uhm Bound to Hiv-1 Rev Ulm
  27. 6hj3 (Na: 6) - Xray Structure of Glic in Complex with Fumarate
    Other atoms: Cl (12);
  28. 6hja (Na: 4) - Xray Structure of Glic in Complex with Glutarate
    Other atoms: Cl (11);
  29. 6hjb (Na: 6) - Xray Structure of Glic in Complex with Malonate
    Other atoms: Cl (11);
  30. 6hji (Na: 6) - Xray Structure of Glic in Complex with Crotonate
    Other atoms: Cl (12);
  31. 6hjx (Na: 1) - X-Ray Structure of A Pentameric Ligand Gated Ion Channel From Erwinia Chrysanthemi (Elic) 7'C Pore Mutant (L238C) in Complex with Nanobody 72
  32. 6hjz (Na: 12) - Xray Structure of Glic in Complex with Succinate
    Other atoms: Cl (14);
  33. 6hk1 (Na: 1) - Crystal Structure of the Thiazole Synthase From Methanothermococcus Thermolithotrophicus Co-Crystallized with Tb-XO4
    Other atoms: Tb (49);
  34. 6hl2 (Na: 2) - Wild-Type Nuoef From Aquifex Aeolicus - Oxidized Form
    Other atoms: Fe (12); Cl (8);
  35. 6hl3 (Na: 2) - Wild-Type Nuoef From Aquifex Aeolicus - Oxidized Form Bound to Nad+
    Other atoms: Fe (12); Cl (2);
  36. 6hla (Na: 2) - Wild-Type Nuoef From Aquifex Aeolicus - Reduced Form Bound to Nadh
    Other atoms: Fe (12);
  37. 6hlb (Na: 3) - X-Ray Structure of Furin in Complex with the Cyclic Peptide C[Succinyl-Phe-2-Nal-(Arg)4-Lys]-Arg-4-Amba
    Other atoms: Ca (3); Cl (1);
  38. 6hld (Na: 3) - X-Ray Structure of Furin in Complex with the Cyclic Peptide C[Succinyl-Phe-2-Nal-(Arg)3-Lys]-Lys-4-Amba
    Other atoms: Ca (3); Cl (1);
  39. 6hle (Na: 3) - X-Ray Structure of Furin in Complex with the P6-P2-Cyclized Peptide H- Lys-Arg-Arg-Tle-Lys-4-Amba
    Other atoms: Ca (3); Cl (1);
  40. 6hlj (Na: 2) - Variant G129S of Nuoef From Aquifex Aeolicus - Oxidized From
    Other atoms: Fe (12);
Page generated: Tue Dec 1 10:46:21 2020

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