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Sodium in PDB, part 201 (files: 8001-8040), PDB 6h6m-6hip

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 8001-8040 (PDB 6h6m-6hip).
  1. 6h6m (Na: 4) - CR10 Murine Norovirus Protruding Domain in Complex with the CD300LF Receptor and Glycochenodeoxycholate (Gcdca)
  2. 6h6r (Na: 1) - Fragment Derived Xiap Inhibitor
    Other atoms: F (1); Zn (1);
  3. 6h6y (Na: 10) - Gi.1 Human Norovirus Protruding Domain in Complex with Nano-7
    Other atoms: Cl (4);
  4. 6h6z (Na: 2) - Gi.1 Human Norovirus Protruding Domain in Complex with Nano-62
  5. 6h70 (Na: 2) - Gi.1 Human Norovirus Protruding Domain in Complex with Nano-62 and 2- Fucosyllactose (2FL)
  6. 6h79 (Na: 1) - Ssx Structure of Lysozyme in Flow - Metal-Kapton Microfluidic Device
    Other atoms: Cl (1);
  7. 6h7j (Na: 2) - Activated Turkey BETA1 Adrenoceptor with Bound Agonist Isoprenaline and Nanobody NB80
  8. 6h7l (Na: 2) - Activated Turkey BETA1 Adrenoceptor with Bound Partial Agonist Dobutamine and Nanobody NB6B9
  9. 6h7m (Na: 2) - Activated Turkey BETA1 Adrenoceptor with Bound Partial Agonist Salbutamol and Nanobody NB6B9
  10. 6h7n (Na: 2) - Activated Turkey BETA1 Adrenoceptor with Bound Partial Agonist Xamoterol and Nanobody NB6B9
  11. 6h7o (Na: 2) - Activated Turkey BETA1 Adrenoceptor with Bound Weak Partial Agonist Cyanopindolol and Nanobody NB6B9
  12. 6h83 (Na: 1) - Mamm Ctd D249H - Copper Form
    Other atoms: Cu (1);
  13. 6h8t (Na: 1) - Crystal Structure of Papain Modify By Achiral Ru(II)Complex
    Other atoms: Ru (2); Cl (3);
  14. 6h90 (Na: 1) - K145A Variant of Beta-Phosphoglucomutase From Lactococcus Lactis Inhibited By Beryllium Trifluoride to 1.3 A.
    Other atoms: F (3); Mg (1);
  15. 6h92 (Na: 1) - Phosphorylated Beta-Phosphoglucomutase From Lactococcus Lactis in An Open Conformer to 2.6 A
    Other atoms: Mg (1);
  16. 6h9a (Na: 1) - Crystal Structure of Anaerobic Ergothioneine Biosynthesis Enzyme From Chlorobium Limicola in Complex with Natural Substrate Trimethyl Histidine.
    Other atoms: Cl (3);
  17. 6h9u (Na: 1) - Crystal Structure of the Bip Nbd and Manf Sap Complex
  18. 6ha3 (Na: 1) - Human Transketolase Variant E160Q in Covalent Complex with Donor Ketose D-Fructose-6-Phosphate
    Other atoms: Mg (1); Ca (1);
  19. 6hac (Na: 1) - Crystal Structure of [Fe]-Hydrogenase (Hmd) Holoenzyme From Methanococcus Aeolicus (Open Form)
    Other atoms: Fe (1);
  20. 6had (Na: 1) - Human Transketolase Variant E160Q
    Other atoms: Mg (1); Ca (1);
  21. 6hae (Na: 2) - Crystal Structure of [Fe]-Hydrogenase (Hmd) From Methanococcus Aeolicus in Complex with Fegp Cofactor and Methenyl- Tetrahydromethanopterin (Close Form B)
    Other atoms: K (4); Fe (2); Cl (2);
  22. 6hah (Na: 1) - Crystal Structure of Paf - P-Sulfonatocalix[6]Arene Complex
  23. 6hav (Na: 2) - Crystal Structure of [Fe]-Hydrogenase (Hmd) From Methanococcus Aeolicus in Complex with Fegp and Methenyl-Tetrahydromethanopterin (Close Form A) at 1.06 A Resolution
    Other atoms: Fe (1);
  24. 6hbn (Na: 3) - High-Salt Structure of Protein Kinase CK2 Catalytic Subunit (Isoform CK2ALPHA/CSKN2A1 Gene Product) in Complex with the Indenoindole-Type Inhibitor THN27
    Other atoms: Cl (10);
  25. 6hbx (Na: 2) - The Structure of the G. Violaceus Guanidine II Riboswitch P2 Stem-Loop with Ethylguanidine
    Other atoms: Br (1);
  26. 6hc5 (Na: 3) - The Structure of the G. Violaceus Guanidine II Riboswitch P2 Stem-Loop with Audouine
    Other atoms: Br (1);
  27. 6hck (Na: 2) - The Transcriptional Regulator Prfa From Listeria Monocytogenes in Complex with Dipeptide Leu-Leu
  28. 6hct (Na: 4) - Crystal Structure of Archeoglobus Fulgidus L7AE Bound to Its Cognate Utr K-Turn
  29. 6hdf (Na: 2) - D170N Variant of Beta-Phosphoglucomutase From Lactococcus Lactis in An Open Conformer to 1.4 A.
  30. 6hdg (Na: 1) - D170N Variant of Beta-Phosphoglucomutase From Lactococcus Lactis Complexed with Beta-G1P in A Closed Conformer to 1.2 A.
  31. 6hdk (Na: 2) - R49A Variant of Beta-Phosphoglucomutase From Lactococcus Lactis Complexed with Aluminium Tetrafluoride and Beta-G6P to 1.2 A.
    Other atoms: F (4); Mg (1); Al (1);
  32. 6hdl (Na: 1) - R49K Variant of Beta-Phosphoglucomutase From Lactococcus Lactis Complexed with Magnesium Trifluoride and Beta-G6P to 1.2 A.
    Other atoms: F (3); Mg (2);
  33. 6hdm (Na: 1) - R49A Variant of Beta-Phosphoglucomutase From Lactococcus Lactis Complexed with Magnesium Trifluoride and Beta-G6P to 1.3 A.
    Other atoms: F (3); Mg (2);
  34. 6hdp (Na: 1) - Human DYRK2 Bound to Scorzodihydrostilbene A
  35. 6hdz (Na: 2) - Pseudomonas Aeruginosa Seryl-Trna Synthetase in Complex with 5'-O-(N- (L-Seryl)-Sulfamoyl)Uridine
  36. 6he1 (Na: 2) - Pseudomonas Aeruginosa Seryl-Trna Synthetase in Complex with 5'-O-(N- (L-Seryl)-Sulfamoyl)N3-Methyluridine
  37. 6he3 (Na: 2) - Pseudomonas Aeruginosa Seryl-Trna Synthetase in Complex with 5'-O-(N- (L-Seryl)-Sulfamoyl)Cytidine
  38. 6hem (Na: 1) - Structure of the C-Terminal Domain of USP25 (748-1048)
  39. 6hhd (Na: 1) - Mouse Prion Protein in Complex with Nanobody 484
    Other atoms: Cl (3);
  40. 6hip (Na: 1) - Structure of SPF45 Uhm Bound to Hiv-1 Rev Ulm
Page generated: Sat Sep 25 14:50:48 2021

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