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Sodium in PDB, part 191 (files: 7601-7640), PDB 6chk-6ctm

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 7601-7640 (PDB 6chk-6ctm).
  1. 6chk (Na: 1) - Crystal Structure of Laci Family Transcriptional Regulator From Lactobacillus Casei, Target Efi-512911, with Bound Tris
    Other atoms: Cl (1);
  2. 6chr (Na: 9) - Crystal Structure of A Group II Intron Lariat with An Intact 3' Splice Site (Pre-2S State)
    Other atoms: Mg (82);
  3. 6cih (Na: 9) - Crystal Structure of A Group II Intron Lariat in the Post-Catalytic State
    Other atoms: Mg (86); Ir (41);
  4. 6cl5 (Na: 6) - Structure of P. Aeruginosa R1 Pyocin Fiber PALES_06171 Comprising C- Terminal Residues 323-701
    Other atoms: Mg (2); Fe (2);
  5. 6cly (Na: 2) - Structure of Human Dna Polymerase Beta Complexed with 8-Clg As the Template Base in A 1-Nucleotide Gapped Dna
    Other atoms: Cl (1);
  6. 6clz (Na: 15) - MT1-Mmp Hpx Domain with Blade 4 Loop Bound to Nanodiscs
    Other atoms: Cl (15);
  7. 6cm1 (Na: 15) - MT1-Mmp Hpx Domain with Blade 2 Loop Bound to Nanodiscs
    Other atoms: Cl (15);
  8. 6cn8 (Na: 4) - High-Resolution Structure of CLPC1-Ntd Binding to Rufomycin-I
    Other atoms: Cl (4);
  9. 6cng (Na: 2) - The X-Ray Crystal Structure of the Streptococcus Pneumoniae Fatty Acid Kinase (Fak) B3 Protein Loaded with Linoleic Acid to 1.47 Angstrom Resolution
  10. 6cni (Na: 6) - Crystal Structure of H105A PGAM5 Dimer
  11. 6cnj (Na: 1) - Structure of the 2ALPHA3BETA Stiochiometry of the Human ALPHA4BETA2 Nicotinic Receptor
  12. 6cnk (Na: 1) - Structure of the 3ALPHA2BETA Stiochiometry of the Human ALPHA4BETA2 Nicotinic Receptor
  13. 6co7 (Na: 3) - Structure of the NVTRPM2 Channel in Complex with CA2+
    Other atoms: Ca (4);
  14. 6cpl (Na: 3) - Crystal Structure of DR11 Presenting the GAG293 Epitope
  15. 6cpm (Na: 3) - Structure of the USP15 Deubiquitinase Domain in Complex with A Third- Generation Inhibitory Ubv
    Other atoms: Ca (5); Zn (2);
  16. 6cpn (Na: 3) - Crystal Structure of DR11 Presenting the RQ13 Peptide
  17. 6cpq (Na: 2) - Structure of Human Dna Polymerase Beta Complexed with 8-Clg in the Template Base Paired with Incoming Non-Hydrolyzable Ctp
    Other atoms: Mg (2); Cl (1);
  18. 6cpr (Na: 2) - Crystal Structure of 4-1BBL/4-1BB Complex in C2 Space Group
    Other atoms: Cl (7);
  19. 6cpv (Na: 12) - Microed Structure of Nak Ion Channel Reveals A Process of Na+ Partition Into the Selectivity Filter
  20. 6cqj (Na: 2) - Crystal Structure of DR1 Presenting the RQ13 Peptide
  21. 6cqp (Na: 9) - High Resolution Crystal Structure of Ftsy-Ng Domain of E. Coli
  22. 6cr3 (Na: 3) - Ternary Complex Crystal Structure of Dna Polymerase Beta with A Dideoxy Terminated Primer with CBR2, Beta, Gamma Datp Analogue
    Other atoms: Mg (1); Br (2); Cl (2);
  23. 6cr4 (Na: 3) - Ternary Complex Crystal Structure of Dna Polymerase Beta with A Dideoxy Terminated Primer with Datp
    Other atoms: Mg (1); Cl (4);
  24. 6cr5 (Na: 3) - Ternary Complex Crystal Structure of Dna Polymerase Beta with A Dideoxy Terminated Primer with CH2-Beta, Gamma Datp Analogue
    Other atoms: Mg (1);
  25. 6cr6 (Na: 3) - Ternary Complex Crystal Structure of Dna Polymerase Beta with A Dideoxy Terminated Primer with Ch-CH3, Beta, Gamma Datp Analogue
    Other atoms: Mg (1);
  26. 6cr7 (Na: 3) - Ternary Complex Crystal Structure of Dna Polymerase Beta with A Dideoxy Terminated Primer with Chf, Beta, Gamma Datp Analogue
    Other atoms: F (1); Mg (1); Cl (3);
  27. 6cr8 (Na: 3) - Ternary Complex Crystal Structure of Dna Polymerase Beta with A Dideoxy Terminated Primer with Chcl (R & S Isomers), Beta, Gamma Datp Analogue
    Other atoms: Mg (1); Cl (3);
  28. 6cr9 (Na: 3) - Ternary Complex Crystal Structure of Dna Polymerase Beta with A Dideoxy Terminated Primer with Cfcl, Beta, Gamma Datp Analogue
    Other atoms: F (1); Mg (1); Cl (2);
  29. 6crb (Na: 3) - Ternary Complex Crystal Structure of Dna Polymerase Beta with A Dideoxy Terminated Primer with CF2, Beta, Gamma Datp Analogue
    Other atoms: F (2); Mg (1);
  30. 6crc (Na: 3) - Ternary Complex Crystal Structure of Dna Polymerase Beta with A Dideoxy Terminated Primer with CCL2, Beta, Gamma Datp Analogue
    Other atoms: Mg (1); Cl (2);
  31. 6crh (Na: 2) - Structure of Human Dna Polymerase Beta Complexed with 8-Clg in the Template Base Paired with Incoming Non-Hydrolyzable Gtp
    Other atoms: Mg (2); Cl (1);
  32. 6cs8 (Na: 1) - High Resolution Crystal Structure of Ftsy-Ng Domain of E. Coli
  33. 6cse (Na: 1) - Crystal Structure of Sodium/Alanine Symporter Agcs with L-Alanine Bound
  34. 6csf (Na: 1) - Crystal Structure of Sodium/Alanine Symporter Agcs with D-Alanine Bound
  35. 6ctf (Na: 6) - Crystal Structure of Gltph Fast Mutant - R276S/M395R
  36. 6cti (Na: 3) - Ternary Complex Crystal Structure of Dna Polymerase Beta with A Dideoxy Terminated Primer with CCL2, Beta, Gamma Dttp Analogue
    Other atoms: Mg (1); Cl (4);
  37. 6ctj (Na: 2) - Ternary Complex Crystal Structure of Dna Polymerase Beta with A Dideoxy Terminated Primer with CHCH3, Beta, Gamma Dttp Analogue
    Other atoms: Mg (1); Cl (3);
  38. 6ctk (Na: 3) - Ternary Complex Crystal Structure of Dna Polymerase Beta with A Dideoxy Terminated Primer with Chf-R/S Isomers, Beta, Gamma Dttp Analogue
    Other atoms: F (1); Mg (1);
  39. 6ctl (Na: 3) - Ternary Complex Crystal Structure of Dna Polymerase Beta with A Dideoxy Terminated Primer with Chcl-R/S Isomers, Beta, Gamma Dttp Analogue
    Other atoms: Mg (1); Cl (2);
  40. 6ctm (Na: 2) - Ternary Complex Crystal Structure of Dna Polymerase Beta with A Dideoxy Terminated Primer with Chcl(R-Isomer), Beta, Gamma Dttp Analogue
    Other atoms: Mg (1); Cl (3);
Page generated: Fri Dec 24 09:51:53 2021

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