Atomistry » Sodium » PDB 5xuz-5yr7
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Sodium in PDB, part 183 (files: 7281-7320), PDB 5xuz-5yr7

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 7281-7320 (PDB 5xuz-5yr7).
  1. 5xuz (Na: 3) - Crystal Structure of Lachnospiraceae Bacterium ND2006 CPF1 in Complex with Crrna and Target Dna (Ccca Pam)
    Other atoms: Mg (2);
  2. 5xvd (Na: 2) - [Nife]-Hydrogenase (Hyb-Type) From Citrobacter Sp. S-77 in An Air- Oxidized Condition
    Other atoms: Ni (2); Mg (2); Fe (32);
  3. 5xwz (Na: 4) - Crystal Structure of A Lactonase From Cladophialophora Bantiana
  4. 5xxs (Na: 1) - Crystal Structure of Native Ribt From Bacillus Subtilis
  5. 5y07 (Na: 2) - Crystal Structure of Adenine Phosphoribosyltransferase From Yersinia Pseudotuberculosis with Prpp.
    Other atoms: Mg (2);
  6. 5y0l (Na: 2) - Structure of 6-Aminohexanoate-Oligomer Hydrolase From Arthrobacter Sp. KI72., D122G/H130Y Muntant
  7. 5y3e (Na: 5) - Crystal Structure of Sars Coronavirus Papain-Like Protease in Complex with Glycerol
    Other atoms: Zn (1);
  8. 5y3q (Na: 5) - Crystal Structure of Sars Coronavirus Papain-Like Protease Conjugated with Beta-Mercaptoethanol
    Other atoms: Zn (1);
  9. 5y3s (Na: 1) - Crystal Structure of Human NLRP1 Leucine Rich Repeat Domain
  10. 5y4a (Na: 2) - Cadmium Directed Assembly of Adenine Phosphoribosyltransferase From Yersinia Pseudotuberculosis.
    Other atoms: Cd (5);
  11. 5y5e (Na: 1) - Crystal Structure of Phospholipase A2 with Inhibitor
    Other atoms: F (3); Ca (1); Cl (5);
  12. 5y7d (Na: 5) - Crystal Structure of Human Endothelial-Overexpressed Lps Associated Factor 1
    Other atoms: Cl (9);
  13. 5y8w (Na: 1) - Crystal Structure Analysis of the BRD4
    Other atoms: Br (1);
  14. 5y8z (Na: 1) - Crystal Structure Analysis of the BRD4
    Other atoms: Br (1);
  15. 5y94 (Na: 1) - Crystal Structure Analysis of the BRD4
    Other atoms: Br (1);
  16. 5yal (Na: 1) - Ferulic Acid Esterase From Streptomyces Cinnamoneus at 1.5 A Resolution
  17. 5yao (Na: 2) - The Complex Structure of SZ529 and Expoxid
  18. 5yax (Na: 1) - Crystal Structure of A Human Neutralizing Antibody Bound to A Hbv PRES1 Peptide
  19. 5yby (Na: 4) - Structure of Human Gliomedin
    Other atoms: Ca (2);
  20. 5ybz (Na: 2) - High Resolution Structure of Complement C1Q-Like Protein 3 C1Q Domain
    Other atoms: Cl (1); Ca (1);
  21. 5ydb (Na: 4) - Crystal Structure of the Complex of Type II Dehydroquinate Dehydratase From Acinetobacter Baumannii with Dehydroquinic Acid at 1.76 Angstrom Resolution
  22. 5ydd (Na: 1) - Crystal Structure of C-Terminal Domain of RV1828 From Mycobacterium Tuberculosis
  23. 5ydi (Na: 4) - Crystal Structure of Acetylcholinesterase Catalytic Subunits of the Malaria Vector Anopheles Gambiae, New Crystal Packing
  24. 5yid (Na: 1) - Crystal Structure of Kni-10395 Bound Plasmepsin II (Pmii) From Plasmodium Falciparum
  25. 5yie (Na: 1) - Crystal Structure of Kni-10742 Bound Plasmepsin II (Pmii) From Plasmodium Falciparum
  26. 5yjg (Na: 1) - Structural Insights Into Periostin Functions
    Other atoms: Mg (8); Zn (1); Ca (6); Cl (16);
  27. 5yjh (Na: 1) - Structural Insights Into Periostin Functions
    Other atoms: Mg (9); Zn (1); Ca (3); Cl (18);
  28. 5yjs (Na: 1) - Structure of Vicilin From Capsicum Annuum
    Other atoms: Cu (2); Cl (1);
  29. 5ykj (Na: 1) - Structural Basis of the Thiol Resolving Mechanism in Yeast Mitochondrial 1-Cys Peroxiredoxin Via Glutathione/Thioredoxin Systems
  30. 5yky (Na: 1) - Crystal Structure of Cross-Linked Tetragonal Hen Egg White Lysozyme Soaked with 10 Mm Rose Bengal and 10MM H2PTCL6
    Other atoms: Pt (2); Cl (12);
  31. 5yl8 (Na: 2) - The Crystal Structure of Inactive Dimeric Peptidyl-Trna Hydrolase From Acinetobacter Baumannii at 1.79 A Resolution
  32. 5yo1 (Na: 1) - Structure of Epepn E298A Mutant in Complex with Puromycin
    Other atoms: Zn (1);
  33. 5yoh (Na: 1) - Mycobacterium Tuberculosis Methionine Aminopeptidase Type 1C (C105M Mutant) in Complex with Methionine
    Other atoms: Co (2);
  34. 5yoi (Na: 1) - Mycobacterium Tuberculosis Methionine Aminopeptidase Type 1C (C105T Mutant) in Complex with Methionine
    Other atoms: Co (2);
  35. 5ypd (Na: 1) - Mycobacterium Tuberculosis Methionine Aminopeptidase Type 1C (C105N Mutant) in Complex with Methionine
    Other atoms: Co (2); Cl (1);
  36. 5ypj (Na: 1) - Mycobacterium Tuberculosis Methionine Aminopeptidase Type 1C (C105N Mutant).
    Other atoms: Co (2); Cl (1);
  37. 5ypk (Na: 7) - Crystal Structure of Ndm-1 Bound to Hydrolyzed Imipenem Representing An EI2 Complex
    Other atoms: Cl (1); Zn (16);
  38. 5yr5 (Na: 1) - Human Methionine Aminopeptidase Type 1B (F309L Mutant) in Complex with Ovalicin
    Other atoms: Co (3);
  39. 5yr6 (Na: 1) - Human Methionine Aminopeptidase Type 1B (F309L Mutant) in Complex with TNP470
    Other atoms: Co (2);
  40. 5yr7 (Na: 1) - Human Methionine Aminopeptidase Type 1B (F309L Mutant)
    Other atoms: Co (4);
Page generated: Sun Aug 22 09:10:07 2021

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