Sodium in PDB 5yal: Ferulic Acid Esterase From Streptomyces Cinnamoneus at 1.5 A Resolution

All present enzymatic activity of Ferulic Acid Esterase From Streptomyces Cinnamoneus at 1.5 A Resolution:
3.1.1.73;

The structure of Ferulic Acid Esterase From Streptomyces Cinnamoneus at 1.5 A Resolution, PDB code: 5yal was solved by H.Tamura, M.Uraji, E.Mizohata, K.Ogawa, T.Inoue, T.Hatanaka, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	42.39 / 1.50
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	52.900, 70.850, 87.170, 90.00, 90.00, 90.00
R / Rfree (%)	18 / 20.1

The binding sites of Sodium atom in the Ferulic Acid Esterase From Streptomyces Cinnamoneus at 1.5 A Resolution (pdb code 5yal). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Ferulic Acid Esterase From Streptomyces Cinnamoneus at 1.5 A Resolution, PDB code: 5yal:

Sodium binding site 1 out of 1 in the Ferulic Acid Esterase From Streptomyces Cinnamoneus at 1.5 A Resolution


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Ferulic Acid Esterase From Streptomyces Cinnamoneus at 1.5 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Na401 b:18.2 occ:1.00 O A:HOH513 2.6 18.8 1.0 OG A:SER191 3.6 13.3 1.0 O A:PHE101 3.7 13.6 1.0 N A:PHE101 3.9 12.5 1.0 NE2 A:HIS268 3.9 15.0 1.0 CB A:PHE101 4.2 13.6 1.0 CB A:SER191 4.3 12.3 1.0 CA A:PHE101 4.4 13.2 1.0 C A:PHE101 4.4 13.3 1.0 CD2 A:HIS268 4.5 14.9 1.0 C A:GLY100 4.7 12.0 1.0 CA A:GLY100 4.9 11.6 1.0

M.Uraji, H.Tamura, E.Mizohata, J.Arima, K.Wan, K.Ogawa, T.Inoue, T.Hatanaka. Loop of Streptomyces Feruloyl Esterase Plays An Important Role in the Enzyme'S Catalyzing the Release of Ferulic Acid From Biomass. Appl. Environ. Microbiol. V. 84 2018.
ISSN: ESSN 1098-5336
PubMed: 29150515
DOI: 10.1128/AEM.02300-17