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Sodium in PDB, part 162 (files: 6441-6480), PDB 5o6y-5ome

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 6441-6480 (PDB 5o6y-5ome).
  1. 5o6y (Na: 21) - Crystal Structure of the BC1960 Peptidoglycan N-Acetylglucosamine Deacetylase in Complex with 4-Naphthalen-1-Yl-~{N}-Oxidanyl-Benzamide
    Other atoms: Cl (4); Zn (4);
  2. 5o6z (Na: 1) - 17BETA-Hydroxysteroid Dehydrogenase 14 Variant T205 in Complex with A Non-Steroidal Quinoline Based Inhibitor
    Other atoms: F (1);
  3. 5o72 (Na: 1) - 17BETA-Hydroxysteroid Dehydrogenase 14 Variant T205 in Complex with A Non-Steroidal Quinoline Based Inhibitor
    Other atoms: F (1);
  4. 5o7c (Na: 1) - 17BETA-Hydroxysteroid Dehydrogenase 14 Variant T205 in Complex with A Non-Steroidal Quinoline Based Inhibitor
    Other atoms: F (1);
  5. 5o7v (Na: 4) - Crystal Structure of the 5F-Tryptophan Rsl Lectin in Complex with Lewis X Tetrasaccharide
    Other atoms: F (14); Cl (1);
  6. 5o8n (Na: 5) - Structure of Thermolysin at Room Temperature Via A Method of Acoustically Induced Rotation.
    Other atoms: Zn (1); Ca (4); Cl (3);
  7. 5o94 (Na: 1) - X-Ray Structure of A Zinc Binding GB1 Mutant
    Other atoms: Zn (1);
  8. 5o9w (Na: 1) - Thebaine 6-O-Demethylase (T6ODM) From Papaver Somniferum in Complex with 2-Oxoglutarate
    Other atoms: Ni (1);
  9. 5oab (Na: 3) - A Novel Crystal Form of Human RNASE6 at Atomic Resolution
    Other atoms: K (1); Cl (3);
  10. 5ob6 (Na: 1) - X-Ray Structure of the Adduct Formed Upon Reaction of Lysozyme with the Compound Fac-[Ruii(Co)3CL2(N3-Im), Im=Imidazole
    Other atoms: Ru (6); Cl (2);
  11. 5ob7 (Na: 1) - X-Ray Structure of the Adduct Formed Upon Reaction of Lysozyme with the Compound Fac-[Ruii(Co)3CL2(N3-Im), Im=Imidazole (Crystal 2)
    Other atoms: Ru (3); Cl (3);
  12. 5ob8 (Na: 1) - X-Ray Structure of the Adduct Formed Upon Reaction of Lysozyme with the Compound Fac-[Ruii(Co)3CL2(N3-Mim), Mim=Methyl-Imidazole (Crystals Grown Using Nacl)
    Other atoms: Ru (2); Cl (3);
  13. 5obg (Na: 5) - Crystal Structure of Glycine Binding Protein in Complex with Strychnine
  14. 5oca (Na: 2) - PCSK9:Fab Complex with Dextran Sulfate
  15. 5ocv (Na: 1) - A Rare Lysozyme Crystal Form Solved Using High-Redundancy 3D Electron Diffraction Data From Micron-Sized Needle Shaped Crystals
  16. 5odc (Na: 2) - Heterodisulfide Reductase / [Nife]-Hydrogenase Complex From Methanothermococcus Thermolithotrophicus at 2.3 A Resolution
    Other atoms: Ni (2); Mg (2); Fe (110); Ca (2);
  17. 5odl (Na: 1) - Single-Stranded Dna-Binding Protein From Bacteriophage ENC34 in Complex with Ssdna
  18. 5oe2 (Na: 1) - Crystal Structure of the Beta-Lactamase Oxa-245
    Other atoms: Cl (2);
  19. 5oee (Na: 6) - Structure of Large Terminase From the Thermophilic Bacteriophage D6E (Crystal Form 3)
  20. 5oer (Na: 1) - Hen Egg-White Lysozyme Refined Against 5000 9 Kev Diffraction Patterns
    Other atoms: Gd (2);
  21. 5ogh (Na: 2) - Structure of Rnase A at High Resolution (1.16 A) in Complex with 3'- Cmp and Sulphate Ions
    Other atoms: Cl (5);
  22. 5ogl (Na: 1) - Structure of Bacterial Oligosaccharyltransferase Pglb in Complex with An Acceptor Peptide and An Lipid-Linked Oligosaccharide Analog
    Other atoms: Mn (2);
  23. 5ogx (Na: 1) - Crystal Structure of Amycolatopsis Cytochrome P450 Reductase Gcob.
    Other atoms: Br (1); Fe (2);
  24. 5ohe (Na: 1) - Globin Sensor Domain of Afgchk (Feiii Form) in Complex with Cyanide
    Other atoms: Fe (8); Cl (4);
  25. 5ohf (Na: 1) - Globin Sensor Domain of Afgchk (Feiii Form) in Complex with Cyanide, Partially Reduced
    Other atoms: Fe (9); Cl (5);
  26. 5ohg (Na: 5) - Enolase in Complex with Rnase E
    Other atoms: Mg (4);
  27. 5ohi (Na: 1) - Crystal Structure of Autotaxin in Complex with Bi-2545
    Other atoms: F (6); K (1); Zn (2); Ca (2); Cl (1);
  28. 5ohq (Na: 1) - Crystal Structure of the KOW6-KOW7 Domain of Human Dsif
    Other atoms: Cl (1);
  29. 5oj1 (Na: 1) - Penicillin Binding Protein 2X (PBP2X) From S.Pneumoniae in Complex with Oxacillin and A Tetrasaccharide
  30. 5ojo (Na: 1) - Sirtuin 5 From Danio Rerio in Complex with 3-Hydroxy-3-Methylglutaryl- CPS1 Peptide
    Other atoms: Zn (2);
  31. 5ok2 (Na: 1) - Structure of the D10N Mutant of Beta-Phosphoglucomutase From Lactococcus Lactis Inhibited with Glucose 6-Phosphate and Tetrafluoroaluminate to 1.1A Resolution.
    Other atoms: F (4); Mg (2); Al (1);
  32. 5olb (Na: 2) - Crystal Structure of Autotaxin in Complex with Pf-8380
    Other atoms: K (1); Zn (2); Ca (2); Cl (3);
  33. 5olg (Na: 1) - Structure of the A2A-STAR2-BRIL562-ZM241385 Complex at 1.86A Obtained From in Meso Soaking Experiments.
  34. 5olh (Na: 1) - Structure of the A2A-STAR2-BRIL562-Vipadenant Complex at 2.6A Obtained From in Meso Soaking Experiments.
  35. 5olo (Na: 1) - Structure of the A2A-STAR2-BRIL562-Tozadenant Complex at 3.1A Obtained From in Meso Soaking Experiments.
  36. 5olv (Na: 1) - Structure of the A2A-STAR2-BRIL562-LUAA47070 Complex at 2.0A Obtained From in Meso Soaking Experiments.
    Other atoms: F (2);
  37. 5olz (Na: 1) - Structure of the A2A-STAR2-BRIL562-Compound 4E Complex at 1.9A Obtained From Bespoke Co-Crystallisation Experiments.
    Other atoms: Cl (1);
  38. 5om1 (Na: 1) - Structure of the A2A-STAR2-BRIL562-Compound 4E Complex at 2.1A Obtained From in Meso Soaking Experiments (1 Hour Soak).
    Other atoms: Cl (2);
  39. 5om4 (Na: 1) - Structure of the A2A-STAR2-BRIL562-Compound 4E Complex at 1.86A Obtained From in Meso Soaking Experiments (24 Hour Soak).
    Other atoms: Cl (1);
  40. 5ome (Na: 1) - The Cryofrozen Atomic Resolution X-Ray Crystal Structure of the Reduced Form (FE2+) Perdeuterated Pyrococcus Furiosus Rubredoxin in D2O (100K, 0.75 Angstrom Resolution)
    Other atoms: Fe (1);
Page generated: Wed Nov 4 05:34:56 2020

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