Atomistry » Sodium » PDB 4xr9-4yhf
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Sodium in PDB, part 132 (files: 5241-5280), PDB 4xr9-4yhf

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 5241-5280 (PDB 4xr9-4yhf).
  1. 4xr9 (Na: 1) - Crystal Structure of CALS8 From Micromonospora Echinospora Cocrystallized with Nad and Tdp-Glucose
  2. 4xrz (Na: 4) - Human Cytochrome P450 2D6 BACE1 Inhibitor 6 Complex
    Other atoms: F (8); Zn (12); Fe (4);
  3. 4xtj (Na: 1) - N-Terminal 43 kDa Fragment of the E. Coli Dna Gyrase B Subunit Grown From 100 Mm Kcl Plus 100 Mm Nacl Condition
    Other atoms: Mg (1); K (1); Cl (1);
  4. 4xtl (Na: 1) - Crystal Structure of the Light-Driven Sodium Pump KR2 in the Monomeric Blue Form, pH 4.3
  5. 4xtn (Na: 10) - Crystal Structure of the Light-Driven Sodium Pump KR2 in the Pentameric Red Form, pH 4.9
  6. 4xto (Na: 5) - Crystal Structure of the Light-Driven Sodium Pump KR2 in the Pentameric Red Form, pH 5.6
  7. 4xul (Na: 1) - Crystal Structure of M. Chilensis MG662 Protein Complexed with Gtp
    Other atoms: Mg (2);
  8. 4xvk (Na: 1) - Binary Complex of Human Polymerase Nu and Dna with the Finger Domain Closed
  9. 4xvl (Na: 1) - Binary Complex of Human Polymerase Nu and Dna with the Finger Domain Open
  10. 4xwi (Na: 1) - X-Ray Crystal Structure of Cmp-Kdo Synthase From Pseudomonas Aeruginosa
  11. 4xwx (Na: 1) - Crystal Structure of the Ptb Domain of Shc
  12. 4xxn (Na: 1) - Structure of Pe-Ppe Domains of Esx-1 Secreted Protein Espb, I222
    Other atoms: Cl (1);
  13. 4xym (Na: 1) - Ca. Korarchaeum Cryptofilum Dinucleotide Forming Acetyl-Coenzyme A Synthetase 1 in Complex with Coenzyme A, Ca-Ampcp and Hgcl+
    Other atoms: Hg (8); Ca (2); Cl (6);
  14. 4y0w (Na: 4) - Yeaz From Pseudomonas Aeruginosa
  15. 4y23 (Na: 1) - Crystal Structure of T399A Precursor Mutant Protein of Gamma-Glutamyl Transpeptidase From Bacillus Licheniformis
  16. 4y5l (Na: 1) - Endothiapepsin in Its Apo Form
  17. 4y6g (Na: 1) - Crystal Structure of Tryptophan Synthase From Salmonella Typhimurium in Complex with N-(4'-Trifluoromethoxybenzoyl)-2-Amino-1- Ethylphosphate (F6F) Inhibitor in the Alpha-Site and Beta-Site.
    Other atoms: F (6);
  18. 4y7d (Na: 2) - Alpha/Beta Hydrolase Fold Protein From Nakamurella Multipartita
    Other atoms: Cl (2);
  19. 4y8f (Na: 3) - Crystal Structure of Triosephosphate Isomerase From Clostridium Perfringens
  20. 4y90 (Na: 3) - Crystal Structure of Triosephosphate Isomerase From Deinococcus Radiodurans
    Other atoms: Ca (5);
  21. 4y96 (Na: 3) - Crystal Structure of Triosephosphate Isomerase From Gemmata Obscuriglobus
    Other atoms: Ca (1);
  22. 4y9v (Na: 1) - GP54 Tailspike of Acinetobacter Baumannii Bacteriophage AP22 in Complex with A. Baumannii Capsular Saccharide
    Other atoms: Cl (3);
  23. 4yaj (Na: 2) - Ca. Korarchaeum Cryptofilum Dinucleotide Forming Acetyl-Coenzyme A Synthetase 1 (Apo Form)
  24. 4yar (Na: 1) - 2-Hydroxyethylphosphonate Dioxygenase (Hepd) E176H
    Other atoms: Cd (10);
  25. 4yb8 (Na: 3) - Ca. Korarchaeum Cryptofilum Dinucleotide Forming Acetyl-Coenzyme A Synthetase 1 in Complex with Phosphate and Adp
    Other atoms: Mg (2);
  26. 4ycm (Na: 1) - Crystal Structure of the Calcium Pump with Bound Marine Macrolide Bls
  27. 4ycn (Na: 1) - Crystal Structure of the Calcium Pump with Bound Marine Macrolide Bllb
  28. 4ycs (Na: 1) - Crystal Structure of Putative Lipoprotein From Peptoclostridium Difficile 630 (Fragment)
  29. 4ycx (Na: 1) - Binary Complex of Human Dna Polymerase Mu with 2-Nt Gapped Dna Substrate
    Other atoms: Mg (1);
  30. 4yd1 (Na: 1) - Ternary Complex of Human Dna Polymerase Mu with 2-Nt Gapped Dna Substrate and An Incoming Nonhydrolyzable Dumpnpp
    Other atoms: Mg (3); Cl (4);
  31. 4yd2 (Na: 3) - Nicked Complex of Human Dna Polymerase Mu with 2-Nt Gapped Dna Substrate
    Other atoms: Cl (3);
  32. 4ydd (Na: 1) - Crystal Structure of the Perchlorate Reductase Pcrab From Azospira Suillum Ps
    Other atoms: Mo (3); Fe (57);
  33. 4ydj (Na: 1) - Crystal Structure of Broadly and Potently Neutralizing Antibody 44- VRC13.01 in Complex with Hiv-1 Clade Ae Strain 93TH057 GP120
    Other atoms: Cl (1);
  34. 4ydr (Na: 1) - Crystal Structure of Oxidized Homoserine Dehydrogenase of Sulfolobus Tokodaii
  35. 4yej (Na: 3) - Tailspike Protein Double Mutant D339A/E372Q of E. Coli Bacteriophage HK620 in Complex with Pentasaccharide
  36. 4yel (Na: 3) - Tailspike Protein Double Mutant D339A/E372A of E. Coli Bacteriophage HK620 in Complex with Hexasaccharide
  37. 4yem (Na: 1) - Carboplatin Binding to Hewl in Nabr Crystallisation Conditions Studied at An X-Ray Wavelength of 0.9163A - New Refinement
    Other atoms: Br (19); Pt (3); Cl (1);
  38. 4yf1 (Na: 2) - 1.85 Angstrom Crystal Structure of LMO0812 From Listeria Monocytogenes Egd-E
  39. 4yh4 (Na: 1) - Crystal Structure of Human BRD4(1) in Complex with 4-[(5- Phenylpyridin-3-Yl)Carbonyl]-3,4-Dihydroquinoxalin-2(1H)-One (Compound 19D)
  40. 4yhf (Na: 24) - Bruton'S Tyrosine Kinase in Complex with A T-Butyl Cyanoacrylamide Inhibitor
    Other atoms: Cl (7);
Page generated: Fri Dec 24 09:47:24 2021

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