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Sodium in PDB 4xwi: X-Ray Crystal Structure of Cmp-Kdo Synthase From Pseudomonas Aeruginosa

Enzymatic activity of X-Ray Crystal Structure of Cmp-Kdo Synthase From Pseudomonas Aeruginosa

All present enzymatic activity of X-Ray Crystal Structure of Cmp-Kdo Synthase From Pseudomonas Aeruginosa:
2.7.7.38;

Protein crystallography data

The structure of X-Ray Crystal Structure of Cmp-Kdo Synthase From Pseudomonas Aeruginosa, PDB code: 4xwi was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.24 / 1.92
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 71.370, 71.370, 231.470, 90.00, 90.00, 120.00
R / Rfree (%) 17.3 / 20.5

Sodium Binding Sites:

The binding sites of Sodium atom in the X-Ray Crystal Structure of Cmp-Kdo Synthase From Pseudomonas Aeruginosa (pdb code 4xwi). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the X-Ray Crystal Structure of Cmp-Kdo Synthase From Pseudomonas Aeruginosa, PDB code: 4xwi:

Sodium binding site 1 out of 1 in 4xwi

Go back to Sodium Binding Sites List in 4xwi
Sodium binding site 1 out of 1 in the X-Ray Crystal Structure of Cmp-Kdo Synthase From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of X-Ray Crystal Structure of Cmp-Kdo Synthase From Pseudomonas Aeruginosa within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Na301

b:67.2
occ:1.00
O B:HOH428 2.6 64.8 1.0
O B:GLY62 2.6 39.0 1.0
C B:GLY62 3.7 37.9 1.0
CA B:PHE63 3.7 38.3 1.0
N B:PHE63 4.2 37.6 1.0
CB B:PHE63 4.3 35.4 1.0
C B:PHE63 4.7 34.8 1.0
CA B:GLY62 4.9 34.2 1.0
O B:HOH414 5.0 38.2 1.0

Reference:

J.W.Fairman, D.M.Dranow, T.E.Edwards, B.L.Staker. X-Ray Crystal Structure of Cmp-Kdo Synthase From Pseudomonas Aeruginosa To Be Published.
Page generated: Mon Oct 7 19:25:39 2024

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