Atomistry » Sodium » PDB 4lgd-4lzd
Atomistry »
  Sodium »
    PDB 4lgd-4lzd »
      4lgd »
      4lgn »
      4lh7 »
      4lhl »
      4li5 »
      4liz »
      4li7 »
      4ll2 »
      4llh »
      4lmj »
      4lmk »
      4lov »
      4loy »
      4lp4 »
      4lpk »
      4lqk »
      4lrt »
      4ls8 »
      4lsp »
      4lsq »
      4lss »
      4lug »
      4lvk »
      4lvm »
      4lvs »
      4lxb »
      4lxh »
      4lxi »
      4ly1 »
      4lxz »
      4lys »
      4lz4 »
      4lzd »
      4lz1 »
      4lyi »
      4lw9 »
      4lpy »
      4lor »
      4lmf »
      4lh6 »

Sodium in PDB, part 111 (files: 4401-4440), PDB 4lgd-4lzd

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 4401-4440 (PDB 4lgd-4lzd).
  1. 4lgd (Na: 3) - Structural Basis For Autoactivation of Human MST2 Kinase and Its Regulation By RASSF5
    Other atoms: Mg (4);
  2. 4lgn (Na: 6) - The Structure of Acidothermus Cellulolyticus Family 74 Glycoside Hydrolase
    Other atoms: K (3);
  3. 4lh6 (Na: 2) - Crystal Structure of A Liga Inhibitor
    Other atoms: Br (1);
  4. 4lh7 (Na: 2) - Crystal Structure of A Liga Inhibitor
  5. 4lhl (Na: 1) - Structure of the N-Terminal Domain of the FLO1 Adhesin (N-FLO1P) From the Yeast Saccharomyces Cerevisiae
  6. 4li5 (Na: 1) - Egfr-K in Complex with N-[3-[[5-Chloro-4-(1H-Indol-3-Yl)Pyrimidin-2- Yl]Amino]-4-Methoxy-Phenyl] Prop-2-Enamide
    Other atoms: Cl (1);
  7. 4li7 (Na: 2) - Tankyrase-1 Complexed with Small Molecule Inhibitor 4-Chloro-5-Cyano- N-{2-[4-(4-Fluorobenzoyl)Piperidin-1-Yl]Ethyl}-2-Methoxybenzamide
    Other atoms: F (2); Cl (2);
  8. 4liz (Na: 1) - Crystal Structure of Coactosin From Entamoeba Histolytica
  9. 4ll2 (Na: 1) - Crystal Structure of Plant Lectin with Two Metal Binding Sites From Cicer Arietinum at 2.6 Angstrom Resolution
    Other atoms: Ca (1);
  10. 4llh (Na: 2) - Substrate Bound Outward-Open State of the Symporter Betp
    Other atoms: As (3); Cl (1);
  11. 4lmf (Na: 4) - C1S CUB1-Egf-CUB2
    Other atoms: Ca (12);
  12. 4lmj (Na: 5) - Glic Liganded-Closed-Channel Conformation, Mutant T25'A
    Other atoms: Cl (5);
  13. 4lmk (Na: 5) - Glic Liganded-Closed-Channel Conformation, Mutant Y27'A
    Other atoms: Cl (5);
  14. 4lor (Na: 2) - C1S CUB1-Egf-CUB2 in Complex with A Collagen-Like Peptide From C1Q
    Other atoms: Ca (3);
  15. 4lov (Na: 3) - Crystal Structure of Fimh in Complex with Heptylmannoside
  16. 4loy (Na: 2) - Crystal Structure Analysis of Thrombin in Complex with Compound D57, 5-Chlorothiophene-2-Carboxylic Acid [(S)-2-[2-Methyl-3-(2- Oxopyrrolidin-1-Yl)Benzenesulfonylamino]-3-(4-Methylpiperazin-1- Yl)- 3-Oxopropyl]Amide (SAR107375)
    Other atoms: F (1); Cl (2);
  17. 4lp4 (Na: 4) - Crystal Structure of the Human Rage VC1 Fragment in Space Group P62
  18. 4lpk (Na: 2) - Crystal Structure of K-Ras Wt, Gdp-Bound
    Other atoms: Ca (2);
  19. 4lpy (Na: 1) - Crystal Structure of Tencon Variant G10
  20. 4lqk (Na: 2) - Structure of the Vaccinia Virus Nf- B Antagonist A46
    Other atoms: Br (1);
  21. 4lrt (Na: 4) - Crystal and Solution Structures of the Bifunctional Enzyme (Aldolase/Aldehyde Dehydrogenase) From Thermomonospora Curvata, Reveal A Cofactor-Binding Domain Motion During Nad+ and Coa Accommodation Whithin the Shared Cofactor-Binding Site
    Other atoms: Mg (2);
  22. 4ls8 (Na: 3) - Crystal Structure of Bacillus Subtilis Beta-Ketoacyl-Acp Synthase II (Fabf) in A Covalent Complex with Cerulenin
    Other atoms: Cl (1);
  23. 4lsp (Na: 3) - Crystal Structure of Broadly and Potently Neutralizing Antibody Vrc- CH31 in Complex with Hiv-1 Clade A/E GP120 93TH057
  24. 4lsq (Na: 4) - Crystal Structure of Broadly and Potently Neutralizing Antibody Vrc- CH31 in Complex with Hiv-1 Clade A/E GP120 93TH057 with Loop D and Loop V5 From Clade A Strain 3415_V1_C1
    Other atoms: Cd (5); Cl (3);
  25. 4lss (Na: 3) - Crystal Structure of Broadly and Potently Neutralizing Antibody VRC01 in Complex with Hiv-1 Clade A Strain KER_2018_11 GP120
  26. 4lug (Na: 2) - Crystal Structure of Inorganic Pyrophosphatase PPA1 From Arabidopsis Thaliana
  27. 4lvk (Na: 1) - Mobm Relaxase Domain (Mobv; MOB_PRE) Bound to Plasmid PMV158 Orit Dna (22NT+3'Phosphate). Mn-Bound Crystal Structure at pH 4.6
    Other atoms: Mn (1);
  28. 4lvm (Na: 1) - Mobm Relaxase Domain (Mobv; MOB_PRE) Bound to Plasmid PMV158 Orit Dna (23NT). Mn-Bound Crystal Structure at pH 6.5
    Other atoms: Mg (1); Mn (2); Cl (5);
  29. 4lvs (Na: 2) - Dna Polymerase Beta Mismatched Substrate Complex with MN2+, 2.5 Min
    Other atoms: Mn (6);
  30. 4lw9 (Na: 6) - Crystal Structure of Vibrio Cholera Major Pseudopilin Epsg
    Other atoms: Zn (32); Pt (12); Ca (14); Cl (9);
  31. 4lxb (Na: 2) - Crystal Structure Analysis of Thrombin in Complex with Compound D58
    Other atoms: F (2); Cl (1);
  32. 4lxh (Na: 1) - Crystal Structure of the S105A Mutant of A Carbon-Carbon Bond Hydrolase, DXNB2 From Sphingomonas Wittichii RW1, in Complex with 3- Cl Hopda
    Other atoms: Cl (1);
  33. 4lxi (Na: 1) - Crystal Structure of the S105A Mutant of A Carbon-Carbon Bond Hydrolase, DXNB2 From Sphingomonas Wittichii RW1, in Complex with 5, 8-Dif Hopda
    Other atoms: F (2);
  34. 4lxz (Na: 3) - Structure of Human HDAC2 in Complex with Saha (Vorinostat)
    Other atoms: Ca (3); Zn (3);
  35. 4ly1 (Na: 3) - Structure of Human HDAC2 in Complex with Inhibitor 4-(Acetylamino)-N- [2-Amino-5-(Thiophen-2-Yl)Phenyl]Benzamide
    Other atoms: Ca (3); Zn (3);
  36. 4lyi (Na: 1) - Crystal Structure of Apo-BRD4(1)
    Other atoms: I (1);
  37. 4lys (Na: 2) - Crystal Structure of BRD4(1) Bound to Colchiceine
  38. 4lz1 (Na: 1) - X-Ray Structure of the Complex Between Human Thrombin and the Tba Deletion Mutant Lacking Thymine 12 Nucleobase
    Other atoms: K (1);
  39. 4lz4 (Na: 2) - X-Ray Structure of the Complex Between Human Thrombin and the Tba Deletion Mutant Lacking Thymine 3 Nucleobase
    Other atoms: K (2);
  40. 4lzd (Na: 1) - Human Dna Polymerase Mu- Apoenzyme
    Other atoms: Cl (1);
Page generated: Tue Dec 1 10:40:10 2020

Last articles

Xe in 6AYK
Xe in 6QII
Xe in 6ASM
Xe in 5NSW
Xe in 6FY9
Xe in 5O1K
Xe in 5O27
Xe in 5M69
Xe in 5KPU
Xe in 5I63
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy