Sodium in PDB 4lpy: Crystal Structure of Tencon Variant G10

The structure of Crystal Structure of Tencon Variant G10, PDB code: 4lpy was solved by A.Teplyakov, G.Obmolova, G.L.Gilliland, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	15.00 / 1.92
Space group	P 32 2 1
Cell size a, b, c (Å), α, β, γ (°)	80.340, 80.340, 73.520, 90.00, 90.00, 120.00
R / Rfree (%)	19.4 / 23.5

The binding sites of Sodium atom in the Crystal Structure of Tencon Variant G10 (pdb code 4lpy). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Tencon Variant G10, PDB code: 4lpy:

Sodium binding site 1 out of 1 in the Crystal Structure of Tencon Variant G10


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Tencon Variant G10 within 5.0Å range: probe atom residue distance (Å) B Occ B:Na1001 b:33.5 occ:1.00 O B:LEU81 2.4 23.4 1.0 O B:HOH1183 2.4 44.3 1.0 O B:HOH1192 2.5 45.7 1.0 C B:LEU81 3.5 24.4 1.0 N B:LEU81 3.9 23.7 1.0 CA B:LEU81 4.2 25.0 1.0 OG B:SER80 4.3 53.2 1.0 OG B:SER82 4.5 33.9 1.0 O B:HOH1110 4.5 25.8 1.0 N B:SER82 4.6 23.2 1.0 CB B:LEU81 4.6 27.7 1.0 CA B:SER82 4.8 25.7 1.0 C B:SER80 5.0 26.8 1.0

A.Teplyakov, G.Obmolova, T.J.Malia, J.Luo, S.A.Jacobs, W.Chan, D.Domingo, A.Baker, K.T.O'neil, G.L.Gilliland. C-Terminal Beta-Strand Swapping in A Consensus-Derived Fibronectin Type III Scaffold. Proteins V. 82 1359 2014.
ISSN: ISSN 0887-3585
PubMed: 24375666
DOI: 10.1002/PROT.24502