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Sodium in PDB, part 105 (files: 4161-4200), PDB 4iic-4j0n

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 4161-4200 (PDB 4iic-4j0n).
  1. 4iic (Na: 2) - Crystal Structure of Beta-Glucosidase 1 From Aspergillus Aculeatus in Complex with Isofagomine
  2. 4iie (Na: 2) - Crystal Structure of Beta-Glucosidase 1 From Aspergillus Aculeatus in Complex with Calystegine B(2)
  3. 4iil (Na: 2) - Crystal Structure of Rfua (TP0298) of T. Pallidum Bound to Riboflavin
    Other atoms: K (1);
  4. 4iis (Na: 1) - Crystal Structure of A Glycosylated Beta-1,3-Glucanase (Hev B 2), An Allergen From Hevea Brasiliensis (Space Group P41)
    Other atoms: As (1);
  5. 4ij7 (Na: 7) - Crystal Structure of Odorant Binding Protein 48 From Anopheles Gambiae (AGAMOBP48) with Peg
  6. 4ije (Na: 5) - Crystal Structure of the Zaire Ebolavirus VP35 Interferon Inhibitory Domain R312A/K319A/R322A Mutant
    Other atoms: K (1);
  7. 4ijk (Na: 1) - Crystal Structure of A Putative 3-Oxoacyl-[Acyl-Carrier Protein]Reductase From Helicobacter Pylori 26695
  8. 4ikb (Na: 2) - Crystal Structure of SNX11 Px Domain
    Other atoms: As (3); Cl (3);
  9. 4ikd (Na: 4) - Crystal Structure of SNX11 Px Domain
    Other atoms: Cl (3);
  10. 4il4 (Na: 6) - The Pentameric Ligand-Gated Ion Channel Glic in Complex with Se-Ddm
    Other atoms: Cl (7);
  11. 4il9 (Na: 6) - The Pentameric Ligand-Gated Ion Channel Glic A237F in Complex with Bromide
    Other atoms: Br (12);
  12. 4ilb (Na: 6) - The Pentameric Ligand-Gated Ion Channel Glic A237F in Complex with Rubidium
    Other atoms: Rb (1); Cl (5);
  13. 4ilc (Na: 6) - The Glic Pentameric Ligand-Gated Ion Channel in Complex with Sulfates
    Other atoms: Cl (5);
  14. 4imk (Na: 1) - Uncrossed Fab Binding to Human Angiopoietin 2
  15. 4imm (Na: 6) - The Crystal Structure of Bamb From Moraxella Catarrhalis
    Other atoms: Mg (1); Ca (3);
  16. 4imq (Na: 1) - Structural Basis of Substrate Specificity and Protease Inhibition in Norwalk Virus
  17. 4imz (Na: 1) - Structural Basis of Substrate Specificity and Protease Inhibition in Norwalk Virus
  18. 4in9 (Na: 1) - Structure of Karilysin Mmp-Like Catalytic Domain in Complex with Inhibitory Tetrapeptide Swfp
    Other atoms: K (1); Zn (2);
  19. 4inb (Na: 1) - Crystal Structure of the N-Terminal Domain of Hiv-1 Capsid in Complex with Benzodiazepine Inhibitor
    Other atoms: F (3);
  20. 4ip0 (Na: 2) - X-Ray Structure of the Complex Uridine Phosphorylase From Vibrio Cholerae with Phosphate Ion at 1.29 A Resolution
    Other atoms: K (1); Cl (2);
  21. 4ip7 (Na: 4) - Structure of the S12D Variant of Human Liver Pyruvate Kinase in Complex with Citrate and Fbp.
    Other atoms: Mn (4);
  22. 4iql (Na: 6) - Crystal Structure of Porphyromonas Gingivalis Enoyl-Acp Reductase II (Fabk) with Cofactors Nadph and Fmn
  23. 4iqu (Na: 1) - Tdt Core in Complex with Inhibitor (2Z,5E)-6-[4-(4-Fluorobenzoyl)-1H- Pyrrol-2-Yl]-2-Hydroxy-4-Oxohexa-2,5-Dienoic Acid
    Other atoms: F (1);
  24. 4iqv (Na: 1) - Tdt Core in Complex with Inhibitor 6-[4-(3-Fluorobenzoyl)-1H-Pyrrol-2- Yl]-2-Hydroxy-4-Oxohexa-2,5-Dienoic Acid and Ssdna
    Other atoms: F (1);
  25. 4iqw (Na: 1) - Tdt Core in Complex with Inhibitor (2Z,5E)-6-[4-(4-Fluorobenzoyl)-1H- Pyrrol-2-Yl]-2-Hydroxy-4-Oxohexa-2,5-Dienoic Acid and Ssdna
    Other atoms: F (1);
  26. 4iqz (Na: 7) - The Crystal Structure of A Large Insert in Rna Polymerase (Rpoc) Subunit From E. Coli
    Other atoms: I (56);
  27. 4irl (Na: 4) - X-Ray Structure of the Card Domain of Zebrafish Gbp-NLRP1 Like Protein
  28. 4irw (Na: 1) - Co-Crystallization of Streptavidin-Biotin Complex with A Lanthanide- Ligand Complex Gives Rise to A Novel Crystal Form
    Other atoms: Tb (5);
  29. 4irz (Na: 1) - Crystal Structure of A4B7 Headpiece Complexed with Fab Natalizumab
    Other atoms: Ca (3);
  30. 4is9 (Na: 1) - Crystal Structure of the Escherichia Coli Lpxc/L-161,240 Complex
    Other atoms: Zn (2);
  31. 4ith (Na: 2) - Crystal Structure of RIP1 Kinase in Complex with Necrostatin-1 Analog
    Other atoms: I (10); Cl (2);
  32. 4iuw (Na: 1) - Crystal Structure of Pepo From Lactobacillus Rhamnosis HN001 (DR20)
    Other atoms: Zn (1);
  33. 4ivh (Na: 1) - Crystal Structure of Qklvffaed Nonapeptide Segment From Amyloid Beta Incorporated Into A Macrocyclic Beta-Sheet Template
    Other atoms: Br (1);
  34. 4iwv (Na: 1) - Crystals Structure of Human Glucokinase in Complex with Small Molecule Activator
    Other atoms: Cl (4);
  35. 4ixc (Na: 1) - Crystal Structure of Human Glucokinase in Complex with A Small Molecule Activator.
    Other atoms: Cl (1);
  36. 4iz7 (Na: 1) - Structure of Non-Phosphorylated ERK2 Bound to the Pea-15 Death Effector Domain
  37. 4izm (Na: 6) - Crystal Structure of Gltph L66C-S300C Mutant Crosslinked with Divalent Mercury
    Other atoms: Hg (3);
  38. 4j02 (Na: 2) - Crystal Structure of Hcv NS5B Polymerase in Complex with [(1R)-5,8- Dichloro-1-Propyl-1,3,4,9-Tetrahydropyrano[3,4-B]Indol-1-Yl]Acetic Acid
    Other atoms: Cl (4);
  39. 4j07 (Na: 5) - Crystal Structure of A Probable Riboflavin Synthase, Beta Chain Ribh (6,7-Dimethyl-8-Ribityllumazine Synthase, Dmrl Synthase, Lumazine Synthase) From Mycobacterium Leprae
  40. 4j0n (Na: 3) - Crystal Structure of A Manganese Dependent Isatin Hydrolase
    Other atoms: Mn (2); Ca (1);
Page generated: Thu Dec 28 11:19:12 2023

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