Atomistry » Sodium » PDB 4i05-4ii8
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Sodium in PDB, part 104 (files: 4121-4160), PDB 4i05-4ii8

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 4121-4160 (PDB 4i05-4ii8).
  1. 4i05 (Na: 1) - Structure of Intermediate Processing Form of Cathepsin B1 From Schistosoma Mansoni
  2. 4i0w (Na: 2) - Structure of the Clostridium Perfringens Cspb Protease
    Other atoms: Cl (3);
  3. 4i12 (Na: 2) - Design and Synthesis of Thiophene Dihydroisoquinolins As Novel Bace-1 Inhibitors
    Other atoms: Cl (1); Zn (3);
  4. 4i25 (Na: 4) - 2.00 Angstroms X-Ray Crystal Structure of Nad- and Substrate-Bound 2- Aminomuconate 6-Semialdehyde Dehydrogenase From Pseudomonas Fluorescens
  5. 4i26 (Na: 3) - 2.20 Angstroms X-Ray Crystal Structure of 2-Aminomuconate 6- Semialdehyde Dehydrogenase From Pseudomonas Fluorescens
  6. 4i27 (Na: 1) - Ternary Complex of Mouse Tdt with Ssdna and Incoming Nucleotide
    Other atoms: Mg (1);
  7. 4i28 (Na: 1) - Binary Complex of Mouse Tdt with Ssdna and Zn++
    Other atoms: Mg (1); Zn (1);
  8. 4i29 (Na: 1) - Binary Complex of Mouse Tdt with Ssdna and Mn++
    Other atoms: Br (1); Mn (2);
  9. 4i2a (Na: 1) - Binary Complex of Mouse Tdt with Ssdna in Absence of Divalent Transition Metal Ion
    Other atoms: Br (1); Mg (1);
  10. 4i2b (Na: 1) - Ternary Complex of Mouse Tdt with Ssdna and Ampcpp
    Other atoms: Mg (2);
  11. 4i2c (Na: 1) - Ternary Complex of Mouse Tdt with Ssdna and Ampcpp
    Other atoms: Mn (2);
  12. 4i2d (Na: 1) - Binary Complex of Mouse Tdt with Ampcpp
    Other atoms: Mg (1); Zn (1);
  13. 4i2e (Na: 1) - Ternary Complex of Mouse Tdt with Ssdna and Ampcpp
    Other atoms: Co (2);
  14. 4i2f (Na: 1) - Binary Complex of Mouse Tdt with Ssdna
    Other atoms: Mg (1); Zn (1);
  15. 4i2g (Na: 1) - Binary Complex of Mouse Tdt with Ssdna
    Other atoms: Co (1); Mg (1);
  16. 4i2h (Na: 1) - Ternary Complex of Mouse Tdt with Ssdna and Ampcpp
    Other atoms: Mg (1); Zn (2);
  17. 4i2r (Na: 4) - 2.15 Angstroms X-Ray Crystal Structure of Nad- and Alternative Substrate-Bound 2-Aminomuconate 6-Semialdehyde Dehydrogenase From Pseudomonas Fluorescens
  18. 4i31 (Na: 2) - Crystal Structure of Hcv NS3/NS4A Protease Complexed with Compound 4
  19. 4i32 (Na: 1) - Crystal Structure of Hcv NS3/4A D168V Protease Complexed with Compound 4
  20. 4i33 (Na: 2) - Crystal Structure of Hcv NS3/4A R155K Protease Complexed with Compound 4
  21. 4i3f (Na: 1) - Crystal Structure of Serine Hydrolase CCSP0084 From the Polyaromatic Hydrocarbon (Pah)-Degrading Bacterium Cycloclasticus Zankles
    Other atoms: Cl (2);
  22. 4i3m (Na: 1) - AER2 Poly-Hamp Domains: L44H HAMP1 Cw-Lock Mutant
    Other atoms: Mg (1); Cl (1);
  23. 4i6n (Na: 1) - Crystal Structure of Trichinella Spiralis UCH37 Catalytic Domain Bound to Ubiquitin Vinyl Methyl Ester
  24. 4i6u (Na: 1) - Crystal Structure of A Y37F Mutant of the Restriction-Modification Controller Protein C.ESP1396I
  25. 4i7y (Na: 1) - Crystal Structure of Human Alpha Thrombin in Complex with A 27-Mer Aptamer Bound to Exosite II
  26. 4i8p (Na: 2) - Crystal Structure of Aminoaldehyde Dehydrogenase 1A From Zea Mays (ZMAMADH1A)
  27. 4i8q (Na: 1) - Structure of the Aminoaldehyde Dehydrogenase 1 E260A Mutant From Solanum Lycopersicum (SLAMADH1-E260A)
  28. 4i9b (Na: 2) - Structure of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (SLAMADH1) with A Thiohemiacetal Intermediate
  29. 4i9q (Na: 2) - Crystal Structure of the Ternary Complex of the D714A Mutant of RB69 Dna Polymerase
    Other atoms: Ca (2);
  30. 4i9x (Na: 1) - Crystal Structure of Human Cytomegalovirus Glycoprotein UL141 Targeting the Death Receptor Trail-R2
    Other atoms: Ca (4);
  31. 4ia5 (Na: 1) - Hydratase From Lactobacillus Acidophilus - Semet Derivative (Apo Lah)
    Other atoms: K (2);
  32. 4ia6 (Na: 2) - Hydratase From Lactobacillus Acidophilus in A Ligand Bound Form (La Lah)
    Other atoms: K (2);
  33. 4ib0 (Na: 2) - X-Ray Structure of Camp Dependent Protein Kinase A in Complex with High Na+ Concentration, Adp and Phosphorylated Peptide PSP20
  34. 4ied (Na: 1) - Crystal Structure of Fus-1 (Oxa-85), A Class D Beta-Lactamase From Fusobacterium Nucleatum Subsp. Polymorphum
    Other atoms: Mg (12); Cl (1);
  35. 4ief (Na: 3) - Complex of Porphyromonas Gingivalis Rgpb Pro- and Mature Domains
    Other atoms: Mg (1); Ba (4); Cl (1); Ca (14);
  36. 4iem (Na: 9) - Human Apurinic/Apyrimidinic Endonuclease (APE1) with Product Dna and MG2+
    Other atoms: Mg (7);
  37. 4igb (Na: 4) - Crystal Structure of the N-Terminal Domain of the Streptococcus Gordonii Adhesin SGO0707
  38. 4igu (Na: 2) - Crystal Structure of the Rgs Domain of CG5036
    Other atoms: Cl (5);
  39. 4ihs (Na: 1) - Crystal Structure of BENM_DBD/Catb Site 1 Dna Complex
  40. 4ii8 (Na: 1) - Lysozyme with Benzyl Alcohol
    Other atoms: Cl (6);
Page generated: Wed Nov 4 05:31:25 2020

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