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Sodium in PDB, part 59 (files: 2321-2360), PDB 3e40-3ept

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 2321-2360 (PDB 3e40-3ept).
  1. 3e40 (Na: 3) - Q138F Hincii Bound to Gttaac and Cocrystallized with 5 Mm CA2+
    Other atoms: Ca (2);
  2. 3e41 (Na: 1) - Q138F Hincii Bound to Gtcgac and 5 Mm CA2+
    Other atoms: Ca (2);
  3. 3e42 (Na: 2) - Q138F Hincii Bound to Gtcgac and CA2+ (Cocrystallized)
    Other atoms: Ca (2);
  4. 3e45 (Na: 1) - Q138F Hincii Bound to Noncognate Dna (Gtgcac) and CA2+
    Other atoms: Ca (2);
  5. 3e4v (Na: 2) - Crystal Structure of Nadh:Fmn Oxidoreductase Like Protein in Complex with Fmn (YP_544701.1) From Methylobacillus Flagellatus Kt at 1.40 A Resolution
  6. 3e5u (Na: 1) - Ocpa Complexed Cprk (C200S)
    Other atoms: Cl (5);
  7. 3e6p (Na: 1) - Crystal Structure of Human Meizothrombin DESF1
  8. 3e6q (Na: 4) - Putative 5-Carboxymethyl-2-Hydroxymuconate Isomerase From Pseudomonas Aeruginosa.
  9. 3e7b (Na: 1) - Crystal Structure of Protein Phosphatase-1 Bound to the Natural Toxin Inhibitor Tautomycin
    Other atoms: Mn (4); Cl (1);
  10. 3e83 (Na: 3) - Crystal Structure of the the Open Nak Channel Pore
    Other atoms: Cs (2);
  11. 3e85 (Na: 2) - Crystal Structure of Pathogenesis-Related Protein Llpr-10.2B From Yellow Lupine in Complex with Diphenylurea
  12. 3e86 (Na: 4) - High Resolution Crystal Structure of the Open Nak Channel Pore
    Other atoms: Cs (2); Ca (1);
  13. 3e89 (Na: 4) - Crystal Structure of the the Open Nak Channel-Low Na+ Complex
    Other atoms: Cs (2);
  14. 3e8g (Na: 4) - Crystal Structure of the the Open Nak Channel-Na+/CA2+ Complex
    Other atoms: Cs (2); Ca (2);
  15. 3e8l (Na: 3) - The Crystal Structure of the Double-Headed Arrowhead Protease Inhibitor A in Complex with Two Trypsins
    Other atoms: Ca (7);
  16. 3e9l (Na: 2) - Crystal Structure of Human PRP8, Residues 1755-2016
    Other atoms: Cl (1);
  17. 3eat (Na: 1) - Crystal Structure of the Pvcb (PA2255) Protein From Pseudomonas Aeruginosa
  18. 3eb5 (Na: 1) - Structure of the CIAP2 Ring Domain
    Other atoms: Zn (2);
  19. 3ebz (Na: 1) - High Resolution Hiv-2 Protease Structure in Complex with Clinical Drug Darunavir
    Other atoms: Cl (8); Zn (9);
  20. 3ec0 (Na: 1) - High Resolution Hiv-2 Protease Structure in Complex with Antiviral Inhibitor Grl-06579A
    Other atoms: Cl (8); Zn (10);
  21. 3ecg (Na: 1) - High Resolution Hiv-2 Protease Structure in Complex with Antiviral Inhibitor Grl-98065
    Other atoms: Cl (9); Zn (11);
  22. 3ecq (Na: 2) - Endo-Alpha-N-Acetylgalactosaminidase From Streptococcus Pneumoniae: Semet Structure
    Other atoms: Ca (4);
  23. 3ed4 (Na: 6) - Crystal Structure of Putative Arylsulfatase From Escherichia Coli
  24. 3eeb (Na: 2) - Structure of the V. Cholerae Rtx Cysteine Protease Domain
  25. 3efp (Na: 1) - Crystal Structure of the Escherichia Coli Twin Arginine Leader Peptide Binding Protein Dmsd in A Monomeric Form
    Other atoms: Cl (6);
  26. 3egk (Na: 2) - Knoble Inhibitor
    Other atoms: Cl (1);
  27. 3eif (Na: 1) - 1.9 Angstrom Crystal Structure of the Active Form of the C5A Peptidase From Streptococcus Pyogenes (Scpa)
    Other atoms: Ca (1);
  28. 3eiy (Na: 2) - Crystal Structure of Inorganic Pyrophosphatase From Burkholderia Pseudomallei with Bound Pyrophosphate
    Other atoms: K (1);
  29. 3ekl (Na: 1) - Structural Characterization of Tetrameric Mycobacterium Tuberculosis Fructose 1,6-Bisphosphate Aldolase - Substrate Binding and Catalysis Mechanism of A Class Iia Bacterial Aldolase
    Other atoms: Zn (2);
  30. 3ekz (Na: 1) - Structural Characterization of Tetrameric Mycobacterium Tuberculosis Fructose 1,6-Bisphosphate Aldolase - Substrate Binding and Catalysis Mechanism of A Class Iia Bacterial Aldolase
    Other atoms: Zn (2);
  31. 3elf (Na: 1) - Structural Characterization of Tetrameric Mycobacterium Tuberculosis Fructose 1,6-Bisphosphate Aldolase - Substrate Binding and Catalysis Mechanism of A Class Iia Bacterial Aldolase
    Other atoms: Zn (2);
  32. 3ems (Na: 1) - Effect of Ariginine on Lysozyme
    Other atoms: Cl (1);
  33. 3ens (Na: 2) - Crystal Structure of Human Fxa in Complex with Methyl (2Z)- 3-[(3-Chloro-1H-Indol-7-Yl)Amino]-2-Cyano-3-{[(3S)-2-Oxo-1- (2-Oxo-2-Pyrrolidin-1-Ylethyl)Azepan-3-Yl]Amino}Acrylate
    Other atoms: Cl (2); Ca (2);
  34. 3enz (Na: 5) - Arsenolytic Structure of Plasmodium Falciparum Purine Nucleoside Phosphorylase with Hypoxanthine, Ribose and Arsenate Ion
    Other atoms: As (6);
  35. 3eoj (Na: 1) - Fmo Protein From Prosthecochloris Aestuarii 2K at 1.3A Resolution
    Other atoms: Mg (8);
  36. 3eor (Na: 2) - Crystal Structure of 2C-Methyl-D-Erythritol 2,4- Clycodiphosphate Synthase Complexed with Ligand
    Other atoms: Zn (1);
  37. 3epg (Na: 4) - Structure of Human Dna Polymerase Iota Complexed with N2- Ethylguanine
  38. 3epi (Na: 1) - Structure of Human Dna Polymerase Iota Complexed with N2- Ethylguanine and Incoming Ttp
  39. 3epr (Na: 1) - Crystal Structure of Putative Had Superfamily Hydrolase From Streptococcus Agalactiae.
  40. 3ept (Na: 1) - Structure of the Rebeccamycin Biosynthetic Enzyme Rebc with Reduced Flavin
Page generated: Fri Dec 24 09:41:52 2021

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