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Sodium in PDB, part 49 (files: 1921-1960), PDB 2xzj-2yeq

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 1921-1960 (PDB 2xzj-2yeq).
  1. 2xzj (Na: 2) - The Aspergillus Fumigatus Sialidase Is A Kdnase: Structural and Mechanistic Insights
  2. 2xzk (Na: 2) - The Aspergillus Fumigatus Sialidase Is A Kdnase: Structural and Mechanistic Insights
    Other atoms: F (12); Cl (2);
  3. 2y00 (Na: 1) - Turkey BETA1 Adrenergic Receptor with Stabilising Mutations and Bound Partial Agonist Dobutamine (Crystal DOB92)
  4. 2y02 (Na: 1) - Turkey BETA1 Adrenergic Receptor with Stabilising Mutations and Bound Agonist Carmoterol
  5. 2y03 (Na: 1) - Turkey BETA1 Adrenergic Receptor with Stabilising Mutations and Bound Agonist Isoprenaline
  6. 2y04 (Na: 1) - Turkey BETA1 Adrenergic Receptor with Stabilising Mutations and Bound Partial Agonist Salbutamol
  7. 2y1k (Na: 1) - Structure of Human Butyrylcholinesterase Inhibited By Cbdp ( 12H Soak): Phosphoserine Adduct
    Other atoms: Cl (1);
  8. 2y2g (Na: 2) - Penicillin-Binding Protein 1B (Pbp-1B) in Complex with An Alkyl Boronate (A01)
    Other atoms: Cl (30);
  9. 2y2h (Na: 2) - Penicillin-Binding Protein 1B (Pbp-1B) in Complex with An Alkyl Boronate (ZA2)
    Other atoms: Cl (20);
  10. 2y2i (Na: 1) - Penicillin-Binding Protein 1B (Pbp-1B) in Complex with An Alkyl Boronate (ZA3)
    Other atoms: Cl (11);
  11. 2y2j (Na: 1) - Penicillin-Binding Protein 1B (Pbp-1B) in Complex with An Alkyl Boronate (ZA4)
    Other atoms: Cl (15); F (1);
  12. 2y2k (Na: 1) - Penicillin-Binding Protein 1B (Pbp-1B) in Complex with An Alkyl Boronate (ZA5)
    Other atoms: Cl (17); F (2);
  13. 2y2l (Na: 2) - Penicillin-Binding Protein 1B (Pbp-1B) in Complex with An Alkyl Boronate (E06)
    Other atoms: F (4); Cl (33);
  14. 2y2m (Na: 1) - Penicillin-Binding Protein 1B (Pbp-1B) in Complex with An Alkyl Boronate (E08)
    Other atoms: Cl (14);
  15. 2y2n (Na: 1) - Penicillin-Binding Protein 1B (Pbp-1B) in Complex with An Alkyl Boronate (E07)
    Other atoms: Cl (22);
  16. 2y2o (Na: 1) - Penicillin-Binding Protein 1B (Pbp-1B) in Complex with An Alkyl Boronate (EO9)
    Other atoms: Cl (14); F (2);
  17. 2y2p (Na: 1) - Penicillin-Binding Protein 1B (Pbp-1B) in Complex with An Alkyl Boronate (Z10)
    Other atoms: F (1); Cl (20);
  18. 2y2q (Na: 3) - Penicillin-Binding Protein 1B (Pbp-1B) in Complex with An Alkyl Boronate (Z06)
    Other atoms: Cl (25);
  19. 2y3c (Na: 1) - Treponema Denticola Variable Protein 1
    Other atoms: Ca (2);
  20. 2y4j (Na: 2) - Mannosylglycerate Synthase in Complex with Lactate
  21. 2y5f (Na: 2) - Factor Xa - Cation Inhibitor Complex
    Other atoms: Cl (1);
  22. 2y5g (Na: 2) - Factor Xa - Cation Inhibitor Complex
    Other atoms: Cl (1);
  23. 2y5h (Na: 2) - Factor Xa - Cation Inhibitor Complex
    Other atoms: Cl (1);
  24. 2y71 (Na: 2) - Structure of Mycobacterium Tuberculosis Type II Dehydroquinase Complexed with (1R,4S,5R)-1,4,5-Trihydroxy- 3-((5-Methylbenzo(B)Thiophen-2-Yl)Methoxy)Cyclohex-2- Enecarboxylate
  25. 2y85 (Na: 11) - Crystal Structure of Mycobacterium Tuberculosis Phosphoribosyl Isomerase with Bound Rcdrp
    Other atoms: Cl (4);
  26. 2y8k (Na: 4) - Structure of CTGH5-CBM6, An Arabinoxylan-Specific Xylanase.
    Other atoms: Ca (1);
  27. 2y8u (Na: 3) - A. Nidulans Chitin Deacetylase
    Other atoms: Co (2); Cl (2);
  28. 2y8v (Na: 1) - Structure of Chitinase, Chic, From Aspergillus Fumigatus.
  29. 2ya0 (Na: 2) - Catalytic Module of the Multi-Modular Glycogen-Degrading Pneumococcal Virulence Factor Spua
    Other atoms: Ca (1);
  30. 2ya1 (Na: 5) - Product Complex of A Multi-Modular Glycogen-Degrading Pneumococcal Virulence Factor Spua
  31. 2ya2 (Na: 1) - Catalytic Module of the Multi-Modular Glycogen-Degrading Pneumococcal Virulence Factor Spua in Complex with An Inhibitor.
    Other atoms: Ca (1);
  32. 2ybf (Na: 1) - Complex of RAD18 (RAD6 Binding Domain) with RAD6B
  33. 2yc3 (Na: 2) - Inhibitors of the Herbicidal Target Ispd
    Other atoms: Cu (2); Cl (1); Cd (3);
  34. 2yc5 (Na: 1) - Inhibitors of the Herbicidal Target Ispd
    Other atoms: Cd (3); Zn (1); Mg (1); Cu (3); Cl (1);
  35. 2ycm (Na: 1) - Inhibitors of Herbicidal Target Ispd
    Other atoms: Cu (1); Cl (1); Cd (3);
  36. 2ycw (Na: 2) - Turkey BETA1 Adrenergic Receptor with Stabilising Mutations and Bound Antagonist Carazolol
  37. 2ycy (Na: 1) - Turkey BETA1 Adrenergic Receptor with Stabilising Mutations and Bound Antagonist Cyanopindolol
  38. 2yd3 (Na: 1) - Crystal Structure of the N-Terminal IG1-2 Module of Human Receptor Protein Tyrosine Phosphatase Sigma
    Other atoms: Cl (1);
  39. 2ydg (Na: 1) - Ascorbate Co-Crystallized Hewl.
  40. 2yeq (Na: 6) - Structure of Phod
    Other atoms: Fe (2); Ca (4);
Page generated: Fri Dec 24 09:41:07 2021

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