Sodium in PDB, part 286 (files: 11401-11440),
PDB 8qzg-8rt3
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 11401-11440 (PDB 8qzg-8rt3).
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8qzg (Na: 1) - 1,3 L,D-Transpeptidase From Gluconobacter Oxydans
Other atoms:
Cl (1);
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8r11 (Na: 1) - Structure of Compound 7 Bound to Sars-Cov-2 Main Protease
Other atoms:
Cl (5);
Br (2);
-
8r12 (Na: 1) - Structure of Compound 8 Bound to Sars-Cov-2 Main Protease
Other atoms:
Cl (3);
-
8r14 (Na: 1) - Structure of Compound 11 Bound to Sars-Cov-2 Main Protease
Other atoms:
Br (2);
Cl (6);
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8r16 (Na: 1) - Structure of Compound 12 Bound to Sars-Cov-2 Main Protease
Other atoms:
Cl (8);
Br (2);
-
8r2y (Na: 3) - Structure of Ctx-M-15 Complexed with Benzoxaborole Ak-29
Other atoms:
Cl (1);
-
8r2z (Na: 2) - Structure of Ctx-M-15 Complexed with Benzoxaborole Ak-425
Other atoms:
Cl (1);
-
8r30 (Na: 3) - Structure of Ctx-M-15 Complexed with Benzoxaborole Ak-408
Other atoms:
Cl (2);
-
8r31 (Na: 3) - Structure of Ctx-M-15 Complexed with Benzoxaborole Ak-412
Other atoms:
Cl (2);
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8r32 (Na: 3) - Crystal Structure of the GLUK2 Ligand-Binding Domain in Complex with L-Glutamate and BPAM344 at 1.60 A Resolution
Other atoms:
F (2);
Cl (4);
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8r34 (Na: 4) - Cryoem Structure of the Symmetric PHO90 Dimer From Yeast with Substrates.
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8r37 (Na: 10) - Klebsiella Pneumoniae Fosfomycin-Resistance Protein (Fosakp)
Other atoms:
Mn (2);
K (2);
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8r39 (Na: 1) - Full-Length Lpmip Mutant Y16F
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8r43 (Na: 1) - Crystal Structure of Paradendryphiella Salina PL7C Alginate Lyase Mutant H110N in Complex with Tri-Mannuronic Acid
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8r6e (Na: 3) - Sars-Cov-2 Nucleocapsid Dimerization Domain
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8r7m (Na: 1) - Ctx-M14 in Complex with Boric Acid and 1,2-Diol Boric Ester
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8r7o (Na: 1) - HUWE1 Wwe Domain in Complex with 2'F-Atp
Other atoms:
F (2);
Cl (3);
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8r7z (Na: 1) - Transcription Factor BARHL2 Homodimer with Spacing Four Bp
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8ral (Na: 3) - CL3E Peptide Bound to the I-Ab Murine Mhc Class II Receptor
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8rbh (Na: 4) - Crystal Structure of the Kelch Domain of Human KLHL12 in Complex with PEF1 Peptide
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8rbi (Na: 1) - Crystal Structure of Paradendryphiella Salina PL7C Alginate Lyase Mutant H124
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8rbu (Na: 2) - Crystal Structure of Hla-A*11:01 in Complex with Svlndilarl, An 10-Mer Epitope From Sars-Cov-2 Spike (S975-984)
Other atoms:
Cl (2);
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8rcv (Na: 2) - Crystal Structure of Hla B*13:01 in Complex with Svlndifsrl, An 10-Mer Epitope From Sars-Cov-2 Spike (S975-984)
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8rdn (Na: 3) - Holomycin Methyltransferase Dtpm with Sah and Xrd-271
Other atoms:
Cl (3);
-
8ref (Na: 2) - Crystal Structure of Hla B*13:01 in Complex with Svlndilarl, An 10-Mer Epitope From Sars-Cov-2 Spike (S975-984)
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8reg (Na: 2) - Lysozyme Measured Via Serial Crystallography From A Kapton Hare-Chip (50 Micron)
Other atoms:
Cl (1);
-
8rge (Na: 1) - Serial Synchrotron in Plate Room Temperature Structure of Lysozyme.
Other atoms:
Cl (1);
-
8rhq (Na: 3) - Crystal Structure of Hla-A*11:01 in Complex with Svlndifsrl, An 10-Mer Epitope From Sars-Cov-2 Spike (S975-984)
Other atoms:
Cl (3);
Mg (1);
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8rja (Na: 4) - Crystal Structure of the F420-Reducing Formylmethanofuran Dehydrogenase Complex From the Ethanotroph Candidatus Ethanoperedens Thermophilum
Other atoms:
Cl (4);
Fe (48);
Zn (4);
W (2);
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8rnv (Na: 3) - Hen Egg White Lysozyme Soaked with Cis-Ru(Dmso)4CL2
Other atoms:
Cl (2);
Ru (2);
-
8rnw (Na: 1) - Hen Egg White Lysozyme Soaked with Trans-Ru(Dmso)4CL2
Other atoms:
Cl (4);
Ru (2);
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8rnx (Na: 2) - Hen Egg White Lysozyme Soaked with [Hisq][Trans-RUCL4(Dmso)(Isq)]
Other atoms:
Cl (3);
Ru (1);
-
8rny (Na: 3) - Hen Egg White Lysozyme Soaked with with [H2IND][Trans-RUCL4(Dmso) (Hind)]
Other atoms:
Cl (8);
Ru (2);
-
8rop (Na: 1) - Crystal Structure of Hla B*18:01 in Complex with Qeirtfsf, An 8-Mer Epitope From Influenza A
Other atoms:
Cl (2);
-
8rov (Na: 2) - Human Dectin-2 with Dimerization Domain
Other atoms:
Ca (4);
-
8rpl (Na: 1) - Amp-Forming Acetyl-Coa Synthetase From Chloroflexota Bacterium with Bound Acetyl Amp
Other atoms:
Mg (3);
-
8rpm (Na: 1) - Lysozyme Structure Based on Automated Real-Time Serial Crystallography Data Processing Using Crystfel
Other atoms:
Cl (2);
-
8rsh (Na: 2) - Lysozyme Measured Via Serial Crystallography From A Silicon Hare Chip
Other atoms:
Cl (1);
-
8rt2 (Na: 1) - Hen Egg White Lysozyme Crystallized with Bioassembler on Earth
Other atoms:
Gd (4);
Cl (7);
-
8rt3 (Na: 1) - Hen Egg White Lysozyme Crystallized with Bioassembler in Space Microgravity Conditions
Other atoms:
Cl (7);
Gd (4);
Page generated: Sun Dec 15 11:43:26 2024
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