Sodium in PDB, part 286 (files: 11401-11440),
PDB 8r12-8s46
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 11401-11440 (PDB 8r12-8s46).
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8r12 (Na: 1) - Structure of Compound 8 Bound to Sars-Cov-2 Main Protease
Other atoms:
Cl (3);
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8r14 (Na: 1) - Structure of Compound 11 Bound to Sars-Cov-2 Main Protease
Other atoms:
Br (2);
Cl (6);
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8r16 (Na: 1) - Structure of Compound 12 Bound to Sars-Cov-2 Main Protease
Other atoms:
Cl (8);
Br (2);
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8r32 (Na: 3) - Crystal Structure of the GLUK2 Ligand-Binding Domain in Complex with L-Glutamate and BPAM344 at 1.60 A Resolution
Other atoms:
F (2);
Cl (4);
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8r34 (Na: 4) - Cryoem Structure of the Symmetric PHO90 Dimer From Yeast with Substrates.
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8r37 (Na: 10) - Klebsiella Pneumoniae Fosfomycin-Resistance Protein (Fosakp)
Other atoms:
Mn (2);
K (2);
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8r43 (Na: 1) - Crystal Structure of Paradendryphiella Salina PL7C Alginate Lyase Mutant H110N in Complex with Tri-Mannuronic Acid
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8r7m (Na: 1) - Ctx-M14 in Complex with Boric Acid and 1,2-Diol Boric Ester
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8r7o (Na: 1) - HUWE1 Wwe Domain in Complex with 2'F-Atp
Other atoms:
F (2);
Cl (3);
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8rbi (Na: 1) - Crystal Structure of Paradendryphiella Salina PL7C Alginate Lyase Mutant H124
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8rbu (Na: 2) - Crystal Structure of Hla-A*11:01 in Complex with Svlndilarl, An 10-Mer Epitope From Sars-Cov-2 Spike (S975-984)
Other atoms:
Cl (2);
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8rcv (Na: 2) - Crystal Structure of Hla B*13:01 in Complex with Svlndifsrl, An 10-Mer Epitope From Sars-Cov-2 Spike (S975-984)
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8ref (Na: 2) - Crystal Structure of Hla B*13:01 in Complex with Svlndilarl, An 10-Mer Epitope From Sars-Cov-2 Spike (S975-984)
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8rge (Na: 1) - Serial Synchrotron in Plate Room Temperature Structure of Lysozyme.
Other atoms:
Cl (1);
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8rhq (Na: 3) - Crystal Structure of Hla-A*11:01 in Complex with Svlndifsrl, An 10-Mer Epitope From Sars-Cov-2 Spike (S975-984)
Other atoms:
Cl (3);
Mg (1);
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8rnv (Na: 3) - Hen Egg White Lysozyme Soaked with Cis-Ru(Dmso)4CL2
Other atoms:
Cl (2);
Ru (2);
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8rnw (Na: 1) - Hen Egg White Lysozyme Soaked with Trans-Ru(Dmso)4CL2
Other atoms:
Cl (4);
Ru (2);
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8rnx (Na: 2) - Hen Egg White Lysozyme Soaked with [Hisq][Trans-RUCL4(Dmso)(Isq)]
Other atoms:
Cl (3);
Ru (1);
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8rny (Na: 3) - Hen Egg White Lysozyme Soaked with with [H2IND][Trans-RUCL4(Dmso) (Hind)]
Other atoms:
Cl (8);
Ru (2);
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8rop (Na: 1) - Crystal Structure of Hla B*18:01 in Complex with Qeirtfsf, An 8-Mer Epitope From Influenza A
Other atoms:
Cl (2);
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8rpl (Na: 1) - Amp-Forming Acetyl-Coa Synthetase From Chloroflexota Bacterium with Bound Acetyl Amp
Other atoms:
Mg (3);
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8rpm (Na: 1) - Lysozyme Structure Based on Automated Real-Time Serial Crystallography Data Processing Using Crystfel
Other atoms:
Cl (2);
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8rt2 (Na: 1) - Hen Egg White Lysozyme Crystallized with Bioassembler on Earth
Other atoms:
Gd (4);
Cl (7);
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8rt3 (Na: 1) - Hen Egg White Lysozyme Crystallized with Bioassembler in Space Microgravity Conditions
Other atoms:
Cl (7);
Gd (4);
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8ru1 (Na: 7) - Chromatin Remodeling Regulator CECR2 with in Crystallo Disulfide Bond
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8ru4 (Na: 2) - Crystal Structure of Human Catenin Beta-1 in Complex with Stitched Peptide Inhibitor
Other atoms:
Cl (1);
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8ruk (Na: 4) - Structure of Oceanobacillus Iheyensis Group II Intron in the Presence of Na+, MG2+, and ARN25850
Other atoms:
Mg (10);
Br (2);
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8rus (Na: 1) - Hen Egg-White Lysozyme (Hewl) Structure From Euxfel Fxe, Multi-Hit Droplet-on-Demand (Dod) Injection, 9.3 Kev Photon Energy, Space Group P432121
Other atoms:
Cl (3);
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8rvc (Na: 4) - Crystal Structure of Alpha Keto Acid C-Methyl-Transferases Mrsa Bound to Ketoarginine
Other atoms:
Mg (4);
-
8rvs (Na: 4) - Crystal Structure of Alpha Keto Acid C-Methyl-Transferases Mrsa Bound to Sam
Other atoms:
Mg (2);
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8rwl (Na: 2) - Crystal Structure of Methanopyrus Kandleri Malate Dehydrogenase Mutant 1
Other atoms:
Cl (3);
-
8rwm (Na: 1) - Crystal Structure of Selenomethionine Derivatized Alpha Keto Acid C- Methyl-Transferases Mrsa
Other atoms:
Mg (3);
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8ryz (Na: 1) - Structures of Selenoneine Synthase Sena From Variovorax Paradoxus
Other atoms:
Ni (1);
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8rzk (Na: 4) - The Michaelis Complex of ZGGH129 D486N From Zobellia Galactanivorans with Neo-B/K-Oligo-Carrageenan Tetrasaccharide (Beta-Kappa Neo-Oligo- Carrageenan DP4).
Other atoms:
Cl (4);
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8s38 (Na: 2) - Crystal Structure of Medicago Truncatula Glutamate Dehydrogenase 2 in Complex with Citrate and Nad
Other atoms:
Ca (3);
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8s39 (Na: 2) - Crystal Structure of Medicago Truncatula Glutamate Dehydrogenase 2 in Complex with Isophthalic Acid and Nad
Other atoms:
Ca (3);
-
8s3a (Na: 8) - Crystal Structure of Medicago Truncatula Glutamate Dehydrogenase 2 in Complex with 2,6-Pyridinedicarboxylic Acid and Nad
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8s3c (Na: 2) - Crystal Structure of Medicago Truncatula Glutamate Dehydrogenase 2 (Unliganded)
Other atoms:
Ca (3);
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8s3d (Na: 3) - Crystal Structure of Medicago Truncatula Glutamate Dehydrogenase 2 in Complex with 2-Amino-2-Hydroxyglutarate (Reaction Intermediate) and Nad
Other atoms:
Ca (6);
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8s46 (Na: 1) - Cdaa-E01 Complex
Other atoms:
Cl (1);
Page generated: Wed Oct 9 13:19:19 2024
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