Sodium in PDB, part 234 (files: 9321-9360),
PDB 6zmu-7a3i
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 9321-9360 (PDB 6zmu-7a3i).
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6zmu (Na: 1) - Crystal Structure of the Germline-Specific Thioredoxin Protein Deadhead (Thioredoxin-1) From Drospohila Melanogaster, P43212
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6zmx (Na: 1) - Crystal Structure of Hemoglobin From Turkey (Meleagiris Gallopova) Crystallized in Orthorhombic Form at 1.4 Angstrom Resolution
Other atoms:
Fe (4);
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6zo7 (Na: 1) - 3-Formylrifamycin Sv Binding to the Access Pocket of Acrb-G619P L and T Protomer
Other atoms:
Cl (1);
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6zo8 (Na: 1) - Minocycline Binding to the Deep Binding Pocket of Acrb-G621P
Other atoms:
Cl (1);
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6zpl (Na: 2) - Inward-Open Structure of Human Glycine Transporter 1 in Complex with A Benzoylisoindoline Inhibitor, Sybody SB_GLYT1#7 and Bound Na and Cl Ions.
Other atoms:
F (12);
Cl (2);
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6zpq (Na: 1) - Crystal Structure of the Open Conformation of Angiotensin-1 Converting Enzyme N-Domain.
Other atoms:
Mg (3);
Zn (4);
Ca (4);
Cl (4);
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6zr6 (Na: 1) - 17BETA-Hydroxysteroid Dehydrogenase Type 14 Variant S205 in Complex with Non-Steroidal Inhibitor
Other atoms:
F (1);
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6zra (Na: 1) - 17BETA-Hydroxysteroid Dehydrogenase Type 14 Variant S205 in Complex with 2-Fluoro-5-Nitrophenol
Other atoms:
F (1);
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6zs1 (Na: 15) - Chaetomium Thermophilum Cuzn-Superoxide Dismutase
Other atoms:
Zn (8);
Cu (4);
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6zsn (Na: 1) - Crystal Structure of Rsgcamp Double Mutant ILE80HIS/VAL116ILE in the Off State (Illuminated)
Other atoms:
Ca (4);
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6zt2 (Na: 1) - 17BETA-Hydroxysteroid Dehydrogenase Type 14 Variant S205 in Complex with 3-Chloro-2,6-Difluorophenol
Other atoms:
F (2);
Cl (1);
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6zt3 (Na: 3) - N-Terminal 47 kDa Fragment of the Mycobacterium Smegmatis Dna Gyrase B Subunit Complexed with Adpnp
Other atoms:
K (2);
Mg (1);
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6ztb (Na: 4) - Crystal Structure of Human P-Cadherin EC1_EC2
Other atoms:
Ca (3);
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6zuk (Na: 1) - Crystal Structure of Dimethylated Rsl-N23H/G68H (Rsl-B6) in Complex with Cucurbit[7]Uril and Zinc
Other atoms:
Zn (6);
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6zul (Na: 4) - Crystal Structure of Dimethylated Rsl in Complex with Cucurbit[7]Uril and Zinc
Other atoms:
Zn (2);
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6zum (Na: 2) - Crystal Structure of Dimethylated Rsl-N23H (Rsl-B3) in Complex with Cucurbit[7]Uril and Zinc
Other atoms:
Zn (2);
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6zwk (Na: 7) - Crystal Structure of the Phosphorylated C-Terminal Tail of Histone H2AX in Complex with A Specific Nanobody (C6 Gammaxbody)
Other atoms:
Cl (1);
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6zxt (Na: 2) - High Resolution Crystal Structure of Chloroplastic Ribose-5-Phosphate Isomerase From Chlamydomonas Reinhardtii
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6zxu (Na: 3) - Catabolic Reductive Dehalogenase Nprdha, N-Terminally Tagged.
Other atoms:
Co (3);
Fe (24);
Cl (3);
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6zxx (Na: 3) - Catabolic Reductive Dehalogenase Nprdha, N-Terminally Tagged.
Other atoms:
Co (3);
Br (12);
Fe (24);
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6zxz (Na: 4) - Sarcin-Ricin Loop Rna From Ecoli with A A2670-2'-OCF3 Modification
Other atoms:
F (9);
K (4);
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6zy0 (Na: 3) - Catabolic Reductive Dehalogenase Nprdha, N-Terminally Tagged, K488Q Variant
Other atoms:
Co (3);
Fe (24);
Cl (2);
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6zy1 (Na: 3) - Catabolic Reductive Dehalogenase Nprdha, N-Terminally Tagged in Complex with 3-Bromo-4-Hydroxybenzoic Acid
Other atoms:
Co (3);
Br (9);
Fe (24);
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6zyr (Na: 1) - Structure of Imp-1 with 2-Mercaptomethyl-Thiazolidine L-Anti-1B
Other atoms:
Zn (8);
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6zzw (Na: 1) - Structure of the N Terminal Domain of BC2L-C Lectin (1-131) in Complex with Globo H (H-Type 3) and Cas No 912569-62-1
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7a0a (Na: 3) - Crystal Structure of Mouse Csad in Apo Form
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7a0l (Na: 1) - Joint Neutron/X-Ray Room Temperature Structure of Perdeuterated Aspergillus Flavus Urate Oxidase in Complex with the 8-Azaxanthine Inhibitor and Catalytic Water Bound in the Peroxo Hole
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7a0s (Na: 1) - 50S Deinococcus Radiodurans Ribosome Bounded with Mycinamicin I
Other atoms:
Mg (367);
Ca (5);
K (1);
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7a1b (Na: 1) - Crystal Structure of Human Protein Kinase CK2ALPHA' (CSNK2A2 Gene Product) in Complex with the Atp-Competitive Inhibitor 5,6-Dibromo- 1H-Triazolo[4,5-B]Pyridine
Other atoms:
Br (2);
Cl (2);
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7a1i (Na: 3) - Crystal Structure of the BILBO2/FPC4 Complex
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7a1r (Na: 1) - Crystal Structure of the C2B Domain of Trypanosoma Brucei Extended Synaptotagmin (E-Syt)
Other atoms:
Cl (7);
Ca (4);
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7a20 (Na: 2) - Azobenzene-Based Inhibitors For Tryptophan Synthase
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7a2j (Na: 1) - Crystal Structure of the Fyn SH3 Domain in Space Group C21 at pH 7.5
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7a2k (Na: 4) - Crystal Structure of the Fyn SH3 Domain in Space Group P1 at pH 7.5
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7a2l (Na: 1) - Crystal Structure of the Fyn SH3 Domain Mutant E129Q in Space Group C21 at pH 4.0
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7a2m (Na: 3) - Crystal Structure of the Fyn SH3 Domain A95S-D99T Mutant in C21 Space Group
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7a2n (Na: 12) - Crystal Structure of the Fyn SH3 Domain A95S-D99T Mutant in Space Group P21
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7a33 (Na: 1) - Crystal Structure of the C-Src SH3 Domain Mutant S94A-T98D-V111L- N113S-T114S at pH 3.0
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7a36 (Na: 1) - Crystal Structure of the C-Src SH3 Domain Mutant V111L-N113S-T114S in 7 M Urea
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7a3i (Na: 3) - Crystal Structure of DPP8 in Complex with A 4-Oxo-B-Lactam Based Inhibitor, LMC375
Other atoms:
Br (6);
Cl (3);
Page generated: Mon Dec 15 11:16:04 2025
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