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Sodium in PDB, part 249 (files: 9921-9960), PDB 7mim-7n4p

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 9921-9960 (PDB 7mim-7n4p).
  1. 7mim (Na: 4) - Mouse TRPV3 in CNW11 Nanodiscs, Closed State at 4 Degrees Celsius
  2. 7min (Na: 4) - Mouse TRPV3 in CNW11 Nanodiscs, Closed State at 42 Degrees Celsius
  3. 7mio (Na: 1) - Mouse TRPV3 in CNW11 Nanodiscs, Open State at 42 Degrees Celsius
  4. 7mis (Na: 1) - Cryo-Em Structure of Sidj-Sdec-Cam Reaction Intermediate Complex
    Other atoms: Mg (2); Ca (1);
  5. 7mj5 (Na: 6) - Complex of Human Thrombin with Xc-43
  6. 7mjc (Na: 2) - Crystal Structure Analysis of ALDH1B1
  7. 7mjd (Na: 2) - Crystal Structure Analysis of ALDH1B1
  8. 7mjx (Na: 3) - Miab in the Complex with 5'-Deoxyadenosine, Methionine and Rna
    Other atoms: Fe (14);
  9. 7mjz (Na: 1) - The Structure of Miab with Pentasulfide Bridge
    Other atoms: Fe (8);
  10. 7mky (Na: 4) - Sars-Cov-2 Frameshifting Pseudoknot Rna
    Other atoms: Mg (9); K (2); Co (1);
  11. 7ml9 (Na: 1) - The MPP75AA1.1 Beta-Pore-Forming Protein From Brevibacillus Laterosporus
    Other atoms: Sm (2);
  12. 7mlr (Na: 1) - X-Ray Crystal Structure of Human BRD4(D1) in Complex with 2-(4-{5-[6- (3,5-Dimethylphenoxy)Pyridin-2-Yl]-4-Methyl-1H-1,2,3-Triazol-1- Yl}Piperidin-1-Yl)-N,N-Dimethylethan-1-Amine (DW34)
  13. 7mq3 (Na: 1) - C9A N55A Streptococcus Pneumoniae Cstr in the Reduced State
  14. 7mrp (Na: 4) - Microed Structure of Lysozyme From Milled Crystals at 1.75A
    Other atoms: Cl (1);
  15. 7mw7 (Na: 1) - Crystal Structure of P1G Mutant of D-Dopachrome Tautomerase
  16. 7mxq (Na: 1) - Crystal Structure of Human Exonuclease 1 EXO1 (Wt) in Complex with 5' Recessed-End Dna (R-1)
    Other atoms: Mn (2);
  17. 7mxr (Na: 1) - Crystal Structure of Human Exonuclease 1 EXO1 (Wt) in Complex with 5' Recessed-End Dna (R-2)
    Other atoms: Mn (3);
  18. 7mxs (Na: 1) - Crystal Structure of Human Exonuclease 1 EXO1 (Wt) in Complex with 5' Recessed-End Dna (Cr)
    Other atoms: Mn (4);
  19. 7mxt (Na: 1) - Crystal Structure of Human Exonuclease 1 EXO1 (Wt) in Complex with 5' Recessed-End Dna (Cmr)
    Other atoms: Mn (3);
  20. 7mxu (Na: 1) - Crystal Structure of Human Exonuclease 1 EXO1 (Wt) in Complex with 5' Flap Dna (CF2)
    Other atoms: Mn (3);
  21. 7mxv (Na: 1) - Crystal Structure of Human Exonuclease 1 EXO1 (Wt) in Complex with 5' Recessed-End Dna (Ur)
    Other atoms: Mn (4);
  22. 7mz0 (Na: 2) - Structure of Human Dna Polymerase Beta Complexed with Dza As the Template Base in A 1-Nucleotide Gapped Dna
  23. 7mz1 (Na: 2) - Structure of Human Dna Polymerase Beta Complexed with Dza in the Template Base Paired with Incoming Non-Hydrolyzable Ttp
    Other atoms: Mg (2);
  24. 7mz2 (Na: 2) - Structure of Human Dna Polymerase Beta Complexed with Dza at N-1 of the Template Base Paired with Incoming Dttp
    Other atoms: Mg (2);
  25. 7mz3 (Na: 2) - Structure of Human Dna Polymerase Beta Complexed with 3-Deaza-3- Methyladenine (3DMEA) As the Template Base in A 1-Nucleotide Gapped Dna
  26. 7mz4 (Na: 2) - Structure of Human Dna Polymerase Beta Complexed with 3-Deaza-3- Methyladenine (3DMEA) in the Template Base Paired with Incoming Dttp
    Other atoms: Mg (2);
  27. 7mz5 (Na: 3) - Cryo-Em Structure of Rtx-Bound Full-Length TRPV1 in C2 State
  28. 7mz6 (Na: 1) - Cryo-Em Structure of Minimal TRPV1 with 1 Perturbed Pi
  29. 7mz7 (Na: 1) - Cryo-Em Structure of Minimal TRPV1 with 4 Partially Bound Rtx
  30. 7mz8 (Na: 2) - Structure of Human Dna Polymerase Beta Complexed with 3-Deaza-3- Methyladenine (3DMEA) at N-1 of the Template Base Paired with Incoming Dttp
    Other atoms: Mg (1);
  31. 7mz9 (Na: 1) - Cryo-Em Structure of Minimal TRPV1 with 1 Partially Bound Rtx
  32. 7mza (Na: 1) - Cryo-Em Structure of Minimal TRPV1 with 2 Bound Rtx in Adjacent Pockets
  33. 7mzb (Na: 1) - Cryo-Em Structure of Minimal TRPV1 with 3 Bound Rtx and 1 Perturbed Pi
  34. 7mzc (Na: 2) - Cryo-Em Structure of Minimal TRPV1 with Rtx Bound in C1 State
  35. 7mzd (Na: 2) - Cryo-Em Structure of Minimal TRPV1 with Rtx Bound in C2 State
  36. 7mze (Na: 1) - Cryo-Em Structure of Minimal TRPV1 with 2 Bound Rtx in Opposite Pockets
  37. 7n16 (Na: 1) - Structure of Tax-4_R421W Apo Closed State
  38. 7n27 (Na: 2) - Crystal Structure of Chromodomain of Cdyl in Complex with Inhibitor UNC6261
    Other atoms: F (30);
  39. 7n4k (Na: 4) - 6218 Tcr in Complex with H2-Db Pa 224
  40. 7n4p (Na: 3) - Crystal Structure of Lizard Cadherin-23 EC1-2
    Other atoms: Ca (6);
Page generated: Thu Dec 28 11:30:25 2023

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