Sodium in PDB 7k64: Binary Titrated Soak Structure of Alkanesulfonate Monooxygenase Msud From Pseudomonas Fluorescens with Fmn

Enzymatic activity of Binary Titrated Soak Structure of Alkanesulfonate Monooxygenase Msud From Pseudomonas Fluorescens with Fmn

All present enzymatic activity of Binary Titrated Soak Structure of Alkanesulfonate Monooxygenase Msud From Pseudomonas Fluorescens with Fmn:
1.14.14.5;

Protein crystallography data

The structure of Binary Titrated Soak Structure of Alkanesulfonate Monooxygenase Msud From Pseudomonas Fluorescens with Fmn, PDB code: 7k64 was solved by J.J.M.Liew, D.P.Dowling, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 65.03 / 2.80
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 94.01, 212.01, 94.46, 90, 118.85, 90
R / Rfree (%) 19.9 / 23.8

Other elements in 7k64:

The structure of Binary Titrated Soak Structure of Alkanesulfonate Monooxygenase Msud From Pseudomonas Fluorescens with Fmn also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Sodium Binding Sites:

The binding sites of Sodium atom in the Binary Titrated Soak Structure of Alkanesulfonate Monooxygenase Msud From Pseudomonas Fluorescens with Fmn (pdb code 7k64). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Binary Titrated Soak Structure of Alkanesulfonate Monooxygenase Msud From Pseudomonas Fluorescens with Fmn, PDB code: 7k64:

Sodium binding site 1 out of 1 in 7k64

Go back to Sodium Binding Sites List in 7k64
Sodium binding site 1 out of 1 in the Binary Titrated Soak Structure of Alkanesulfonate Monooxygenase Msud From Pseudomonas Fluorescens with Fmn


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Binary Titrated Soak Structure of Alkanesulfonate Monooxygenase Msud From Pseudomonas Fluorescens with Fmn within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Na403

b:50.2
occ:1.00
 OD1 E:ASP55 2.8 55.5 1.0
CD1 E:TRP57 3.5 52.7 1.0
SD F:MET89 3.7 54.0 1.0
CG E:ASP55 3.7 52.9 1.0
OD2 E:ASP55 3.9 55.3 1.0
CG F:MET89 4.0 52.1 1.0
CG1 F:VAL85 4.1 42.9 1.0
NH2 E:ARG77 4.2 39.9 0.5
CG E:TRP57 4.3 51.9 1.0
CE F:MET89 4.3 44.6 1.0
NE1 E:TRP57 4.4 58.2 1.0
CB E:TRP57 4.4 51.9 1.0
CE E:MET89 4.8 44.9 1.0

Reference:

J.J.M.Liew, I.El Saudi, S.V.Nguyen, D.K.Wicht, D.P.Dowling. Structures of the Alkanesulfonate Monooxygenase Msud Provide Insight Into C-S Bond Cleavage, Substrate Scope, and An Unexpected Role For the Tetramer J.Biol.Chem. 2021.
ISSN: ESSN 1083-351X
Page generated: Mon Jul 12 15:58:17 2021

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