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Sodium in PDB, part 233 (files: 9281-9320), PDB 6z5t-6zjr

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 9281-9320 (PDB 6z5t-6zjr).
  1. 6z5t (Na: 2) - Sars-Cov-2 Macrodomain in Complex with Adp-Ribose
  2. 6z5x (Na: 1) - The Rsl - Sulfonato-Calix[8]Arene Complex, P213 Form, Acetate pH 4.8
  3. 6z6a (Na: 1) - KEAP1 Macrocycle Complex
    Other atoms: Cl (1);
  4. 6z6i (Na: 9) - Sars-Cov-2 Macrodomain in Complex with Adp-Hpd
  5. 6z6u (Na: 24) - 1.25 A Structure of Human Apoferritin Obtained From Titan Mono-Bcor Microscope
    Other atoms: Mg (2);
  6. 6z72 (Na: 4) - Sars-Cov-2 Macrodomain in Complex with Adp-Hpm
  7. 6z74 (Na: 2) - Structure of the Transcriptional Repressor ATU1419 (Vanr) in Complex with A Fortuitous Citrate From Agrobacterium Fabrum
    Other atoms: Zn (4);
  8. 6z81 (Na: 3) - Tsabd Bound to the Inhibitor
    Other atoms: Ni (4); Zn (2);
  9. 6z8c (Na: 3) - Full Length Mutant Sodium Channel Navms in Complex with Compound 4
  10. 6z8v (Na: 1) - X-Ray Structure of the Complex Between Human Alpha Thrombin and A Thrombin Binding Aptamer Variant (Tba-3L), Which Contains 1-Beta-D- Lactopyranosyl Residue in the Side Chain of THY3 at N3.
    Other atoms: K (1);
  11. 6z8w (Na: 1) - X-Ray Structure of the Complex Between Human Alpha Thrombin and A Thrombin Binding Aptamer Variant (Tba-3G), Which Contains 1-Beta-D- Glucopyranosyl Residue in the Side Chain of THY3 at N3.
    Other atoms: K (1);
  12. 6z8x (Na: 1) - X-Ray Structure of the Complex Between Human Alpha Thrombin and A Thrombin Binding Aptamer Variant (Tba-3LEU), Which Contains Leucyl Amide in the Side Chain of THY3 at N3.
    Other atoms: K (1);
  13. 6z9c (Na: 1) - Structure of Human POLDIP2, A Multifaceted Adaptor Protein in Metabolism and Genome Stability
  14. 6z9e (Na: 32) - 1.55 A Structure of Human Apoferritin Obtained From Data Subset of Titan Mono-Bcor Microscope
  15. 6z9f (Na: 32) - 1.56 A Structure of Human Apoferritin Obtained From Data Subset of Titan Mono-Bcor Microscope
  16. 6z9v (Na: 1) - Human Class I Major Histocompatibility Complex, A02 Allele, Presenting Iigwmwipv
    Other atoms: Ca (1);
  17. 6z9z (Na: 11) - Atomic Resolution X-Ray Structure of the Uridine Phosphorylase From Vibrio Cholerae on Crystals Grown Under Microgravity
    Other atoms: Mg (2);
  18. 6zb6 (Na: 9) - Crystal Structure of Lolium Rigidum Gstf in Complex with S-(P- Nitrobenzyl) Glutathione
  19. 6zd2 (Na: 2) - Structure of Apo Telomerase From Candida Tropicalis Truncated From C- Terminal Domain
  20. 6zde (Na: 1) - 17BETA-Hydroxysteroid Dehydrogenase Type 14 Variant S205 in Complex with Pentafluorophenol
    Other atoms: F (5);
  21. 6zdi (Na: 1) - 17BETA-Hydroxysteroid Dehydrogenase Type 14 Variant S205 in Complex with 2-Fluoro-5-Nitrophenol
    Other atoms: F (1);
  22. 6zdr (Na: 1) - Crystal Structure of Stabilized A2A Adenosine Receptor A2AR-STAR2-Bril in Complex with Chromone 4D
  23. 6zdv (Na: 1) - Crystal Structure of Stabilized A2A Adenosine Receptor A2AR-STAR2-Bril in Complex with Chromone 5D
  24. 6ze3 (Na: 1) - Fad-Dependent Oxidoreductase From Chaetomium Thermophilum in Complex with Fragment (4-Methoxycarbonylphenyl)Methylazanium
    Other atoms: Mg (1);
  25. 6ze4 (Na: 2) - Fad-Dependent Oxidoreductase From Chaetomium Thermophilum in Complex with Fragment 4-Oxo-N-[(1S)-1-(Pyridin-3-Yl)Ethyl]-4-(Thiophen-2-Yl) Butanamide
    Other atoms: Mg (1);
  26. 6ze6 (Na: 1) - Fad-Dependent Oxidoreductase From Chaetomium Thermophilum in Complex with Fragment 4-Nitrocatechol
    Other atoms: Cl (1); Mg (3);
  27. 6ze7 (Na: 1) - Chaetomium Thermophilum Fad-Dependent Oxidoreductase in Complex with 4-Nitrophenol
    Other atoms: Mg (5);
  28. 6ze8 (Na: 6) - Crystal Structure of Human Chitotriosidase-1 (Hchit) Catalytic Domain in Complex with Compound Oatd-01
    Other atoms: Cl (6);
  29. 6zfe (Na: 1) - Crystal Structure of Murine S100A9 Mutant C80A Bound to Calcium and Zinc
    Other atoms: Ca (2); Zn (2);
  30. 6zgo (Na: 2) - Thrombin in Complex with D-Phe-Pro-2-Chlorofuran Derivative (13L)
    Other atoms: Cl (1);
  31. 6zhp (Na: 1) - Crystal Structure of Ompf Porin Soaked in Ciprofloxacin Metaloantibiotic
    Other atoms: Mg (1);
  32. 6zhv (Na: 12) - Crystal Structure of Ompf Porin Soaked in Ciprofloxacin Metaloantibiotic
    Other atoms: Mg (3);
  33. 6zhz (Na: 5) - Olep-Oleandolide(Deo) in High Salt Crystallization Conditions
    Other atoms: Fe (6);
  34. 6zi3 (Na: 7) - Crystal Structure of Olep-6DEB Bound to L-Rhamnose
    Other atoms: Fe (6);
  35. 6zi7 (Na: 6) - Crystal Structure of Olep-Oleandolide(Deo) Bound to L-Rhamnose
    Other atoms: Fe (6);
  36. 6zjd (Na: 2) - Crystal Structure of Human Adenylate Kinase 3, AK3, in Complex with Inhibitor Atp
    Other atoms: Mg (2); Cl (3);
  37. 6zje (Na: 1) - Crystal Structure of Human Adenylate Kinase 3, AK3, in Complex with Inhibitor AP5A
    Other atoms: Mg (1); Cl (2);
  38. 6zjp (Na: 3) - Cold-Adapted Beta-D-Galactosidase From Arthrobacter Sp. 32CB Mutant E517Q
  39. 6zjq (Na: 5) - Cold-Adapted Beta-D-Galactosidase From Arthrobacter Sp. 32CB Mutant E517Q in Complex with Galactose
  40. 6zjr (Na: 2) - Cold-Adapted Beta-D-Galactosidase From Arthrobacter Sp. 32CB Mutant E517Q in Complex with Lactulose
Page generated: Fri Dec 24 09:55:05 2021

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