Sodium in PDB, part 233 (files: 9281-9320),
PDB 8icy-9icy
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 9281-9320 (PDB 8icy-9icy).
-
8icy (Na: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex + Thymidine- 5'-Triphosphate, Soaked in the Presence of Dttp and MNCL2
Other atoms:
Mn (1);
-
8icz (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of of Datp (1 Millimolar), MNCL2 (5 Millimolar), and Lithium Sulfate (75 Millimolar)
-
8kme (Na: 2) - Crystal Structure of Human Alpha-Thrombin Inhibited with SEL2770.
-
9icb (Na: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex + 2'- Deoxyadenosine-5'-Triphosphate, Soaked in the Presence of Datp and COCL2
Other atoms:
Co (2);
-
9icc (Na: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex + 2'- Deoxyadenosine-5'-Triphosphate, Soaked in the Presence of Datp and CRCL3
Other atoms:
Cr (1);
-
9ice (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Datp (1 Millimolar) and CUCL2 (0.1 Millimolar)
-
9icf (Na: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex + 2'- Deoxyadenosine-5'-Triphosphate, Soaked in the Presence of Datp and ZNCL2
Other atoms:
Zn (2);
-
9icg (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Dctp (1 Millimolar) and ZNCL2 (1 Millimolar)
Other atoms:
Zn (3);
-
9ich (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Dgtp (1 Millimolar) and ZNCL2 (1 Millimolar)
Other atoms:
Zn (3);
-
9ici (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Dttp (1 Millimolar) and ZNCL2 (1 Millimolar)
Other atoms:
Zn (2);
-
9icj (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna
-
9ick (Na: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex, Soaked in the Presence of Artificial Mother Liquor
-
9icl (Na: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex, Soaked in the Presence of Pyrophosphate and MNCL2
Other atoms:
Mn (2);
-
9icm (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Six Base Pairs of Double Stranded Dna (No 5'-Phosphate)
-
9icn (Na: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex + 2',3'- Dideoxycytidine-5'-Triphosphate, Soaked in the Presence of Ddctp and MGCL2
Other atoms:
Mg (1);
-
9ico (Na: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex, Soaked in the Presence of Dttp and MGCL2
-
9icp (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Six Base Pairs of Dna; Soaked in the Presence of Pyrophosphate (1 Millimolar) and MGCL2 (5 Millimolar)
-
9icq (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Six Base Pairs of Dna; Soaked in the Presence of Datp (1 Millimolar) and MNCL2 (5 Millimolar)
Other atoms:
Mn (2);
-
9icr (Na: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex + 2'- Deoxycytidine-5'-Triphosphate, Soaked in the Presence of Dctp and MNCL2
Other atoms:
Mn (2);
-
9ics (Na: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex + 2',3'- Dideoxycytidine-5'-Triphosphate, Soaked in the Presence of Ddctp and MNCL2
Other atoms:
Mn (2);
-
9ict (Na: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex + 2'- Deoxyguanosine-5'-Triphosphate, Soaked in the Presence of Dgtp and MNCL2
Other atoms:
Mn (2);
-
9icu (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Six Base Pairs of Dna; Soaked in the Presence of Dttp (1 Millimolar) and MNCL2 (5 Millimolar)
Other atoms:
Mn (1);
-
9icv (Na: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex + 2'- Deoxyadenosine-5'-Triphosphate, Soaked in the Presence of Datp and ZNCL2
Other atoms:
Zn (3);
-
9icw (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Six Base Pairs of Dna; Native Structure
-
9icx (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Six Base Pairs of Dna (Non Gapped Dna Only)
-
9icy (Na: 2) - Dna Polymerase Beta (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna (Non Gapped Dna Only)
Page generated: Thu Dec 17 13:14:54 2020
|
