Sodium in PDB 6z9c: Structure of Human POLDIP2, A Multifaceted Adaptor Protein in Metabolism and Genome Stability

The structure of Structure of Human POLDIP2, A Multifaceted Adaptor Protein in Metabolism and Genome Stability, PDB code: 6z9c was solved by A.A.Kulik, K.Maruszczak, N.L.M.Nabi, R.J.Bingham, C.D.O.Cooper, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	23.88 / 2.80
Space group	P 62
Cell size a, b, c (Å), α, β, γ (°)	120.138, 120.138, 49.516, 90.00, 90.00, 120.00
R / Rfree (%)	21.6 / 28.8

The binding sites of Sodium atom in the Structure of Human POLDIP2, A Multifaceted Adaptor Protein in Metabolism and Genome Stability (pdb code 6z9c). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Structure of Human POLDIP2, A Multifaceted Adaptor Protein in Metabolism and Genome Stability, PDB code: 6z9c:

Sodium binding site 1 out of 1 in the Structure of Human POLDIP2, A Multifaceted Adaptor Protein in Metabolism and Genome Stability


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Structure of Human POLDIP2, A Multifaceted Adaptor Protein in Metabolism and Genome Stability within 5.0Å range: probe atom residue distance (Å) B Occ A:Na401 b:29.4 occ:1.00 O A:ALA208 2.0 59.2 1.0 OE1 A:GLU78 2.1 32.0 1.0 O A:HOH519 2.5 17.4 1.0 CD A:GLU78 3.1 31.8 1.0 C A:ALA208 3.2 65.0 1.0 OE2 A:GLU78 3.3 38.0 1.0 N A:ALA208 4.0 69.8 1.0 N A:PRO209 4.1 61.6 1.0 CA A:ALA208 4.2 64.6 1.0 CD A:PRO209 4.3 59.6 1.0 CG A:LYS207 4.3 0.6 1.0 CG A:GLU78 4.5 31.1 1.0 CB A:ALA208 4.7 63.9 1.0 O A:HOH517 4.8 31.6 1.0 CB A:LYS207 4.9 97.6 1.0

A.A.Kulik, K.Maruszczak, N.L.M.Nabi, R.J.Bingham, C.D.O.Cooper. Crystal Structure and Modelling of Human POLDIP2, A Multifaceted Adaptor Protein in Metabolism and Genome Stability To Be Published.