Sodium in PDB, part 225 (files: 8961-9000),
PDB 6v04-6vf5
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 8961-9000 (PDB 6v04-6vf5).
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6v04 (Na: 1) - DYNU16 Crystal Structure, A Putative Protein in the Dynemicin Biosynthetic Locus
Other atoms:
Mg (1);
Cl (3);
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6v1a (Na: 1) - Immune Receptor Complex
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6v1q (Na: 1) - Two-Pore Channel 3
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6v2t (Na: 1) - X-Ray Structure of A Sugar N-Formyltransferase From Shewanella Sp FDAARGOS_354
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6v4s (Na: 7) - A Closed Pore Conformation of A Pentameic Ligand-Gated Ion Channel with Additional N-Terminal Domain
Other atoms:
Cl (5);
Ca (5);
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6v61 (Na: 2) - Crystal Structure of Metallo Beta Lactamase From Hirschia Baltica in the Complex with the Inhibitor Captopril
Other atoms:
Cl (4);
Zn (2);
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6v64 (Na: 2) - Crystal Structure of Human Thrombin Bound to Ppack with Tryptophans Replaced By 5-F-Tryptophan
Other atoms:
F (9);
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6v6g (Na: 1) - Crystal Structure of Ctx-M-14 E166A/P167S/D240G Beta-Lactamase
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6v6z (Na: 8) - Crystal Structure of N-(4-((4-Methoxy-N-(2,2,2-Trifluoroethyl)Phenyl) Sulfonamido)Isoquinolin-1-Yl)-N-((4-Methoxyphenyl)Sulfonyl)Glycine Bound to Human KEAP1 Kelch Domain
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6v7z (Na: 1) - Human CD1D Presenting Alpha-Galactosylceramide in Complex with Vhh Nanobody 1D22
Other atoms:
Cl (1);
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6v8g (Na: 9) - Gltph Mutant - Y204L A345V V366A
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6v8j (Na: 4) - Crystal Structure of Ara H 8.0201
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6v8u (Na: 1) - Kaiso (ZBTB33) Zinc Finger Dna Binding Domain in Complex with A Modified Kaiso Binding Sequence (Kbs)
Other atoms:
Zn (3);
Cl (1);
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6v8y (Na: 2) - Structure of A Sodium Potassium Ion Channel
Other atoms:
K (3);
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6v94 (Na: 1) - Expanding the Chemical Landscape of SOS1 Activators Using Fragment Based Methods
Other atoms:
F (1);
Mg (1);
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6v9f (Na: 1) - Expanding the Chemical Landscape of SOS1 Activators Using Fragment Based Methods
Other atoms:
Mg (1);
Cl (1);
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6v9j (Na: 1) - Expanding the Chemical Landscape of SOS1 Activators Using Fragment Based Methods
Other atoms:
F (1);
Mg (1);
Cl (1);
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6v9l (Na: 1) - Expanding the Chemical Landscape of SOS1 Activators Using Fragment Based Methods
Other atoms:
F (1);
Mg (1);
Cl (1);
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6v9m (Na: 1) - Expanding the Chemical Landscape of SOS1 Activators Using Fragment Based Methods
Other atoms:
F (1);
Mg (1);
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6v9n (Na: 1) - Expanding the Chemical Landscape of SOS1 Activators Using Fragment Based Methods
Other atoms:
Mg (1);
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6v9o (Na: 1) - Expanding the Chemical Landscape of SOS1 Activators Using Fragment Based Methods
Other atoms:
Mg (1);
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6vb1 (Na: 1) - Hla-B*15:02 Complexed with A Synthetic Peptide
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6vb2 (Na: 1) - Hla-B*15:02 Complexed with A Synthetic Peptide
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6vb3 (Na: 2) - Hla-B*15:01 Complexed with A Synthetic Peptide
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6vb5 (Na: 1) - Hla-B*15:02 Complexed with A Synthetic Peptide
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6vb7 (Na: 1) - Hla-B*15:02 Complexed with A Synthetic Peptide
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6vbb (Na: 2) - 2.60 Angstrom Resolution Crystal Structure of Peptidase S41 From Acinetobacter Baumannii
Other atoms:
Cl (3);
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6vce (Na: 1) - Hiv-1 Wild Type Protease with Grl-026-18A, A Crown-Like Tetrahydropyranotetrahydrofuran with A Bridged Methylene Group As A P2 Ligand
Other atoms:
F (4);
Cl (6);
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6vcf (Na: 2) - Crystal Structure of Nitrosotalea Devanaterra Carotenoid Cleavage Dioxygenase, Iron Form
Other atoms:
Fe (6);
Cl (1);
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6vcg (Na: 2) - Crystal Structure of Nitrosotalea Devanaterra Carotenoid Cleavage Dioxygenase, Cobalt Form
Other atoms:
Co (6);
Cl (2);
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6vch (Na: 2) - Crystal Structure of Nitrosotalea Devanaterra Carotenoid Cleavage Dioxygenase in Complex with 3-Hydroxy-Beta-Apo-14'-Carotenal
Other atoms:
Co (6);
Cl (2);
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6vea (Na: 1) - Structure of the Glutamate-Like Receptor GLR3.2 Ligand-Binding Domain in Complex with Glycine
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6vel (Na: 1) - Crystal Structure of Human E-Cadherin Bound By Mouse Monoclonal Antibody 66E8FAB
Other atoms:
Ca (2);
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6vez (Na: 1) - Dna Polymerase Mu, 8-Oxorgtp:at Pre-Catalytic Ternary Complex, 20 Mm CA2+ (60 Min)
Other atoms:
Ca (3);
-
6vf0 (Na: 2) - Dna Polymerase Mu, 8-Oxorgtp:at Reaction State Ternary Complex, 50 Mm MG2+ (30 Min)
Other atoms:
Cl (1);
Mg (2);
-
6vf1 (Na: 2) - Dna Polymerase Mu, 8-Oxorgtp:at Product State Ternary Complex, 50 Mm MG2+ (120 Min)
Other atoms:
Mg (2);
Cl (1);
-
6vf2 (Na: 2) - Dna Polymerase Mu, 8-Oxorgtp:at Product State Ternary Complex, 50 Mm MG2+ (960 Min)
Other atoms:
Mg (1);
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6vf3 (Na: 1) - Dna Polymerase Mu, 8-Oxorgtp:at Ground State Ternary Complex, 50 Mm MN2+ (15 Min)
Other atoms:
Mn (8);
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6vf4 (Na: 1) - Dna Polymerase Mu, 8-Oxorgtp:at Reaction State Ternary Complex, 50 Mm MN2+ (30 Min)
Other atoms:
Mn (5);
-
6vf5 (Na: 1) - Dna Polymerase Mu, 8-Oxorgtp:at Product State Ternary Complex, 50 Mm MN2+ (120 Min)
Other atoms:
Mn (7);
Cl (1);
Page generated: Thu Dec 28 11:28:30 2023
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