Sodium in PDB 6v1q: Two-Pore Channel 3

Sodium Binding Sites:

The binding sites of Sodium atom in the Two-Pore Channel 3 (pdb code 6v1q). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Two-Pore Channel 3, PDB code: 6v1q:

Sodium binding site 1 out of 1 in 6v1q

Go back to Sodium Binding Sites List in 6v1q
Sodium binding site 1 out of 1 in the Two-Pore Channel 3


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Two-Pore Channel 3 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na801

b:48.8
occ:1.00
O B:THR251 3.8 41.9 1.0
O A:THR251 3.8 41.9 1.0
CG2 B:VAL623 4.2 41.9 1.0
CG2 A:VAL623 4.2 41.9 1.0
ND2 B:ASN624 4.3 39.3 1.0
ND2 A:ASN624 4.3 39.3 1.0
CG2 B:THR251 4.4 41.9 1.0
CA B:ASN624 4.4 39.3 1.0
CG2 A:THR251 4.4 41.9 1.0
CA A:ASN624 4.4 39.3 1.0
CB B:ASN624 4.5 39.3 1.0
CB A:ASN624 4.5 39.3 1.0
N B:ASN624 4.6 39.3 1.0
N A:ASN624 4.6 39.3 1.0
C B:THR251 4.7 41.9 1.0
C A:THR251 4.7 41.9 1.0
OG1 B:THR251 4.8 41.9 1.0
OG1 A:THR251 4.8 41.9 1.0
O B:THR250 4.8 42.9 1.0
O A:THR250 4.8 42.9 1.0
CG B:ASN624 4.9 39.3 1.0
CG A:ASN624 4.9 39.3 1.0
C B:VAL623 4.9 41.9 1.0
C A:VAL623 4.9 41.9 1.0

Reference:

M.S.Dickinson, A.Myasnikov, J.Eriksen, N.Poweleit, R.M.Stroud. Resting State Structure of the Hyper-Depolarization Activated Two-Pore Channel 3 To Be Published.
Page generated: Tue Dec 15 14:42:21 2020

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