Sodium in PDB, part 198 (files: 7881-7920),
PDB 6fmq-6g3o
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 7881-7920 (PDB 6fmq-6g3o).
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6fmq (Na: 7) - KEAP1 - Peptide Complex
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6foa (Na: 1) - Human Xylosyltransferase 1 Apo Structure
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6fop (Na: 2) - Glycoside Hydrolase Family 81 From Clostridium Thermocellum (CTLAM81A), Mutant E515A
Other atoms:
Ni (2);
Mg (4);
Ca (3);
Cl (4);
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6fp4 (Na: 1) - Thioredoxin Glutathione Reductase From Schistosoma Mansoni in Complex with 1,8-Naphthyridine-2-Carboxylic Acid
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6fpd (Na: 1) - AB21 Protein From Agaricus Bisporus
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6fqs (Na: 1) - 3.11A Complex of S.Aureus Gyrase with Imidazopyrazinone T3 and Dna
Other atoms:
F (3);
Mn (2);
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6fqv (Na: 2) - 2.60A Binary Complex of S.Aureus Gyrase with Uncleaved Dna
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6frn (Na: 1) - Structure of F420H2 Oxidase (Fpra) Co-Crystallized with 10MM Tb-XO4 and Calcium Chloride
Other atoms:
Tb (8);
Ca (15);
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6fro (Na: 1) - Crystal Structure of Hen Egg-White Lysozyme Co-Crystallized in Presence of 100 Mm Tb-XO4 and 100 Mm Potassium Iodide.
Other atoms:
Tb (1);
I (5);
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6fsq (Na: 1) - Structure of A3_BGFPD, An Artificial Bi-Domain Protein Based on Two Different Alpharep Domains : A3 and A Gfp Binding Domain (Bgfpd)
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6ft8 (Na: 1) - Crystal Structure of CLK1 in Complex with Inhibitor 8G
Other atoms:
Cl (1);
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6ft9 (Na: 3) - Crystal Structure of CLK1 in Complex with Inhibitor 16
Other atoms:
Br (6);
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6ftr (Na: 1) - Serial Femtosecond Crystallography at Megahertz Pulse Rates
Other atoms:
Cl (2);
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6fue (Na: 6) - Periplasmic Coiled Coil Domain of the Fapf Amyloid Transporter
Other atoms:
Zn (11);
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6fwb (Na: 1) - Crystal Structure of MAT2A at 1.79 Angstron Resolution
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6fwq (Na: 1) - Structure of An E333Q Variant of the GH99 Endo-Alpha-Mannanase From Bacteroides Xylanisolvens in Complex with Alpha-1,3-Mannobiose and Alpha-1,2-Mannobiose
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6fxj (Na: 7) - Structure of Coproheme Decarboxylase From Listeria Monocytogenes in Complex with Iron Coproporphyrin III
Other atoms:
Fe (5);
Cl (1);
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6fxp (Na: 1) - Crystal Structure of S. Aureus Glucosaminidase B
Other atoms:
Cl (2);
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6fxq (Na: 5) - Structure of Coproheme Decarboxylase From Listeria Monocytogenes During Turnover
Other atoms:
Fe (10);
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6fyu (Na: 4) - Structure of H7(A/Shanghai/2/2013) Influenza Hemagglutinin in Complex SD36
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6fyz (Na: 3) - Development and Characterization of A Cns-Penetrant Benzhydryl Hydroxamic Acid Class Iia Histone Deacetylase Inhibitor
Other atoms:
F (3);
Zn (6);
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6fz0 (Na: 2) - Crystal Structure of the Mety Sam V Riboswitch
Other atoms:
Mg (1);
Br (1);
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6fzp (Na: 3) - Ppar Gamma Complex
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6g00 (Na: 1) - Crystal Structure of A GH8 Xylanase From Teredinibacter Turnerae
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6g0e (Na: 2) - BRD4 (BD1) in Complex with Apsc-Derived Ligands
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6g0x (Na: 3) - Tailspike Protein of E. Coli Bacteriophage HK620 in Complex with Pentasaccharide
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6g1b (Na: 1) - Corynebacterium Glutamicum Oxyr, Oxidized Form
Other atoms:
Ni (1);
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6g1d (Na: 1) - Corynebacterium Glutamicum Oxyr C206 Mutant
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6g2q (Na: 3) - Ternary Complex Crystal Structure of Dna Polymerase Beta with A Dideoxy Terminated Primer with Chcl (S-Isomer), Beta, Gamma Dttp Analogue
Other atoms:
Mg (1);
Cl (2);
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6g2u (Na: 21) - Crystal Structure of the Human Glutamate Dehydrogenase 2 (HGDH2)
Other atoms:
Cl (19);
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6g2w (Na: 1) - Crystal Structure of the P97 D2 Domain in A Helical Split-Washer Conformation
Other atoms:
F (1);
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6g2x (Na: 1) - Crystal Structure of the P97 D2 Domain in A Helical Split-Washer Conformation
Other atoms:
F (2);
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6g2y (Na: 1) - Crystal Structure of the P97 D2 Domain in A Helical Split-Washer Conformation
Other atoms:
F (2);
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6g2z (Na: 1) - Crystal Structure of the P97 D2 Domain in A Helical Split-Washer Conformation
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6g30 (Na: 1) - Crystal Structure of the P97 D2 Domain in A Helical Split-Washer Conformation
Other atoms:
Cl (1);
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6g35 (Na: 1) - Crystal Structure of Haspin in Complex with 5-Bromotubercidin
Other atoms:
Co (1);
Br (4);
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6g36 (Na: 1) - Crystal Structure of Haspin in Complex with 5-Chlorotubercidin
Other atoms:
Co (1);
Cl (1);
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6g39 (Na: 1) - Crystal Structure of Haspin F605Y Mutant in Complex with 5- Iodotubercidin
Other atoms:
I (4);
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6g3e (Na: 1) - Crystal Structure of Edds Lyase in Complex with Formate
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6g3o (Na: 3) - Crystal Structure of Human HDAC2 in Complex with (R)-6-[3,4-Dioxo-2- (4-Trifluoromethoxy-Phenylamino)-Cyclobut-1-Enylamino]-Heptanoic Acid Hydroxyamide
Other atoms:
F (9);
Zn (3);
Ca (3);
Page generated: Wed Nov 13 13:04:46 2024
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