Sodium in PDB 6fxp: Crystal Structure of S. Aureus Glucosaminidase B

The structure of Crystal Structure of S. Aureus Glucosaminidase B, PDB code: 6fxp was solved by S.Pintar, D.Turk, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.95 / 2.03
Space group	P 61 2 2
Cell size a, b, c (Å), α, β, γ (°)	151.770, 151.770, 122.510, 90.00, 90.00, 120.00
R / Rfree (%)	21.2 / 22

The structure of Crystal Structure of S. Aureus Glucosaminidase B also contains other interesting chemical elements:

Chlorine

(Cl)

2 atoms

The binding sites of Sodium atom in the Crystal Structure of S. Aureus Glucosaminidase B (pdb code 6fxp). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of S. Aureus Glucosaminidase B, PDB code: 6fxp:

Sodium binding site 1 out of 1 in the Crystal Structure of S. Aureus Glucosaminidase B


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of S. Aureus Glucosaminidase B within 5.0Å range: probe atom residue distance (Å) B Occ A:Na304 b:22.1 occ:0.50 O A:ILE26 2.0 25.9 1.0 O A:TYR29 2.2 27.5 1.0 C A:ILE26 3.2 26.1 1.0 C A:TYR29 3.4 27.3 1.0 H A:TYR29 3.7 2.0 0.0 O A:HOH441 3.9 46.0 1.0 CA A:ILE26 4.1 26.0 1.0 N A:ASN27 4.2 29.1 1.0 N A:TYR29 4.2 24.7 1.0 CA A:THR30 4.2 30.8 1.0 N A:THR30 4.2 25.6 1.0 CG2 A:THR30 4.3 25.4 1.0 CA A:ASN27 4.3 27.5 1.0 CA A:TYR29 4.4 30.1 1.0 H2 A:HOH441 4.5 2.0 0.0 C A:ASN27 4.5 29.1 1.0 H1 A:HOH441 4.6 2.0 0.0 O A:HOH418 4.7 33.1 1.0 H A:ASN28 4.7 2.0 0.0 N A:ASN28 4.7 26.1 1.0 O A:GLN25 4.8 22.4 1.0 CB A:THR30 4.8 27.2 1.0 CB A:ILE26 4.8 26.3 1.0 O A:ASN27 5.0 26.1 1.0

S.Pintar, D.Turk. Crystal Structure of S. Aureus Glucosaminidase B To Be Published.