Sodium in PDB 6g2z: Crystal Structure of the P97 D2 Domain in A Helical Split-Washer Conformation

All present enzymatic activity of Crystal Structure of the P97 D2 Domain in A Helical Split-Washer Conformation:
3.6.4.6;

The structure of Crystal Structure of the P97 D2 Domain in A Helical Split-Washer Conformation, PDB code: 6g2z was solved by L.Stach, R.M.L.Morgan, P.S.Freemont, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	40.01 / 1.92
Space group	P 61
Cell size a, b, c (Å), α, β, γ (°)	92.389, 92.389, 65.988, 90.00, 90.00, 120.00
R / Rfree (%)	22.3 / 24.7

The binding sites of Sodium atom in the Crystal Structure of the P97 D2 Domain in A Helical Split-Washer Conformation (pdb code 6g2z). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of the P97 D2 Domain in A Helical Split-Washer Conformation, PDB code: 6g2z:

Sodium binding site 1 out of 1 in the Crystal Structure of the P97 D2 Domain in A Helical Split-Washer Conformation


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of the P97 D2 Domain in A Helical Split-Washer Conformation within 5.0Å range: probe atom residue distance (Å) B Occ A:Na808 b:72.0 occ:1.00 OD1 A:ASN624 2.2 46.1 0.4 ND2 A:ASN624 2.6 43.7 0.4 CG A:ASN624 2.7 45.8 0.4 O3B A:ADP807 3.0 44.4 1.0 NZ A:LYS524 3.1 35.6 1.0 CA A:PRO520 3.1 40.9 1.0 CB A:PRO520 3.5 41.7 1.0 CE A:LYS524 3.6 41.0 1.0 N A:PRO520 3.8 43.2 1.0 CG A:PRO520 3.9 53.1 1.0 CB A:ASN624 4.1 47.2 0.6 PB A:ADP807 4.1 38.9 1.0 N A:GLY521 4.2 36.4 1.0 CB A:ASN624 4.2 48.0 0.4 C A:PRO520 4.2 42.1 1.0 O A:PRO519 4.2 39.2 1.0 C A:PRO519 4.3 42.3 1.0 O2B A:ADP807 4.3 41.1 1.0 ND2 A:ASN624 4.4 45.8 0.6 CD A:PRO520 4.5 44.7 1.0 O A:GLY518 4.6 41.9 1.0 O1B A:ADP807 4.8 41.5 1.0 CG A:ASN624 4.8 52.9 0.6 CA A:ASN624 4.9 50.0 0.4 CA A:ASN624 4.9 50.0 0.6 N A:ASN624 4.9 43.6 1.0

L.Stach, R.M.L.Morgan, L.Makhlouf, A.Douangamath, F.Von Delft, P.S.Freemont. Crystal Structure of the P97 D2 Domain in A Helical Split-Washer Conformation To Be Published.