Atomistry » Sodium » PDB 1v55-1w4n
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Sodium in PDB, part 20 (files: 761-800), PDB 1v55-1w4n

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 761-800 (PDB 1v55-1w4n).
  1. 1v55 (Na: 2) - Bovine Heart Cytochrome C Oxidase at the Fully Reduced State
    Other atoms: Mg (2); Zn (2); Fe (4); Cu (6);
  2. 1v6p (Na: 4) - Crystal Structure of Cobrotoxin
    Other atoms: Cu (18); Cl (1);
  3. 1v6s (Na: 3) - Crystal Structure of Phosphoglycerate Kinase From Thermus Thermophilus HB8
  4. 1v70 (Na: 1) - Crystal Structure of Probable Antibiotics Synthesis Protein From Thermus Thermophilus HB8
  5. 1v7t (Na: 2) - Triclinic Lysozyme with Low Solvent Content Obtained By Phase Transition
  6. 1v8z (Na: 3) - X-Ray Crystal Structure of the Tryptophan Synthase B2 Subunit From Hyperthermophile, Pyrococcus Furiosus
  7. 1vau (Na: 1) - Xenon Derivative of Hen Egg-White Lysozyme
    Other atoms: Xe (3); Cl (2);
  8. 1vbw (Na: 2) - Crystal Structure of Bitter Gourd Trypsin Inhibitor
    Other atoms: K (1);
  9. 1vby (Na: 1) - Crystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U Mutaion, and MN2+ Bound
    Other atoms: Mn (2);
  10. 1vc5 (Na: 2) - Crystal Structure of the Wild Type Hepatitis Delta Virus Gemonic Ribozyme Precursor, in Edta Solution
  11. 1vct (Na: 2) - Crystal Structure of Putative Potassium Channel Related Protein From Pyrococcus Horikoshii
    Other atoms: Cl (2);
  12. 1ve8 (Na: 1) - X-Ray Analyses of Oligonucleotides Containing 5- Formylcytosine, Suggesting A Structural Reason For Codon- Anticodon Recognition of Mitochondrial Trna-Met; Part 1, D(Cgcgaatt(F5C)Gcg)
  13. 1vel (Na: 2) - Mycobacterium Smegmatis Dps Tetragonal Form
    Other atoms: Cd (10);
  14. 1vi6 (Na: 10) - Crystal Structure of Ribosomal Protein S2P
  15. 1viz (Na: 1) - Crystal Structure of An Hypothetical Protein
  16. 1vk1 (Na: 1) - Conserved Hypothetical Protein From Pyrococcus Furiosus Pfu- 392566-001
  17. 1vkg (Na: 2) - Crystal Structure of Human HDAC8 Complexed with Cra-19156
    Other atoms: Zn (2);
  18. 1vlm (Na: 1) - Crystal Structure of Sam-Dependent Methyltransferase, Possible Histamine N-Methyltransferase (TM1293) From Thermotoga Maritima at 2.20 A Resolution
  19. 1vmf (Na: 1) - Crystal Structure of A Ybjq-Like Fold Protein of Unknown Function (BH3498) From Bacillus Halodurans at 1.46 A Resolution
  20. 1vmh (Na: 1) - Crystal Structure of Uncharacterized Conserved Protein Yjbq/UPF0047 Family, Ortholog Yugu B.Subtilis (15023806) From Clostridium Acetobutylicum at 1.31 A Resolution
  21. 1vmj (Na: 1) - Crystal Structure of A Putative Thiamin Phosphate Synthase (TM0723) From Thermotoga Maritima MSB8 at 1.52 A Resolution
  22. 1vq4 (Na: 86) - The Structure of the Transition State Analogue "Daa" Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
    Other atoms: Mg (117); K (3); Cd (5); Cl (22);
  23. 1vq5 (Na: 86) - The Structure of the Transition State Analogue "Raa" Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
    Other atoms: Mg (118); K (3); Cd (5); Cl (22);
  24. 1vq6 (Na: 86) - The Structure of C-Hpmn and Cca-Phe-Cap-Bio Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
    Other atoms: Mg (117); K (2); Cd (5); Cl (22);
  25. 1vq7 (Na: 86) - The Structure of the Transition State Analogue "Dca" Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
    Other atoms: Mg (118); K (3); Cd (5); Cl (22);
  26. 1vq8 (Na: 75) - The Structure of Ccda-Phe-Cap-Bio and the Antibiotic Sparsomycin Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
    Other atoms: Sr (114); Mg (94); K (2); Cd (5); Cl (22);
  27. 1vq9 (Na: 75) - The Structure of Cca-Phe-Cap-Bio and the Antibiotic Sparsomycin Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
    Other atoms: Sr (114); Mg (94); K (2); Cd (5); Cl (22);
  28. 1vqk (Na: 75) - The Structure of Ccda-Phe-Cap-Bio Bound to the A Site of the Ribosomal Subunit of Haloarcula Marismortui
    Other atoms: Sr (114); Mg (93); K (2); Cd (5); Cl (22);
  29. 1vql (Na: 75) - The Structure of the Transition State Analogue "Dcsn" Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
    Other atoms: Sr (114); Mg (94); K (2); Cd (5); Cl (22);
  30. 1vqm (Na: 75) - The Structure of the Transition State Analogue "Dan" Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
    Other atoms: Sr (114); Mg (94); K (2); Cd (5); Cl (22);
  31. 1vqn (Na: 75) - The Structure of Cc-Hpmn and Cca-Phe-Cap-Bio Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
    Other atoms: Sr (114); Mg (94); K (2); Cd (5); Cl (22);
  32. 1vqo (Na: 75) - The Structure of Ccpmn Bound to the Large Ribosomal Subunit Haloarcula Marismortui
    Other atoms: Sr (114); Mg (94); K (2); Cd (5); Cl (22);
  33. 1vqp (Na: 75) - The Structure of the Transition State Analogue "Rap" Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
    Other atoms: Sr (114); Mg (94); K (3); Cd (5); Cl (22);
  34. 1vr5 (Na: 2) - Crystal Structure of Oligopeptide Abc Transporter, Periplasmic Oligopeptide-Binding (TM1223) From Thermotoga Maritima at 1.73 A Resolution
    Other atoms: Cl (2);
  35. 1vzq (Na: 1) - Complex of Thrombin with Designed Inhibitor 7165
    Other atoms: Ca (1);
  36. 1w15 (Na: 2) - Rat Synaptotagmin 4 C2B Domain in the Presence of Calcium
    Other atoms: Cl (9); Ca (3);
  37. 1w16 (Na: 2) - Rat Synaptotagmin 4 C2B Domain in the Absence of Calcium
    Other atoms: Cl (7);
  38. 1w2b (Na: 86) - Trigger Factor Ribosome Binding Domain in Complex with 50S
    Other atoms: Mg (117); K (2); Cd (5); Cl (22);
  39. 1w37 (Na: 1) - 2-Keto-3-Deoxygluconate(Kdg) Aldolase of Sulfolobus Solfataricus
  40. 1w4n (Na: 2) - Agao Covalent Complex with Tranylcypromine
    Other atoms: Cu (2);
Page generated: Fri Dec 24 09:38:54 2021

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