Sodium in PDB, part 20 (files: 761-800),
PDB 1v55-1w4n
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 761-800 (PDB 1v55-1w4n).
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1v55 (Na: 2) - Bovine Heart Cytochrome C Oxidase at the Fully Reduced State
Other atoms:
Mg (2);
Zn (2);
Fe (4);
Cu (6);
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1v6p (Na: 4) - Crystal Structure of Cobrotoxin
Other atoms:
Cu (18);
Cl (1);
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1v6s (Na: 3) - Crystal Structure of Phosphoglycerate Kinase From Thermus Thermophilus HB8
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1v70 (Na: 1) - Crystal Structure of Probable Antibiotics Synthesis Protein From Thermus Thermophilus HB8
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1v7t (Na: 2) - Triclinic Lysozyme with Low Solvent Content Obtained By Phase Transition
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1v8z (Na: 3) - X-Ray Crystal Structure of the Tryptophan Synthase B2 Subunit From Hyperthermophile, Pyrococcus Furiosus
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1vau (Na: 1) - Xenon Derivative of Hen Egg-White Lysozyme
Other atoms:
Xe (3);
Cl (2);
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1vbw (Na: 2) - Crystal Structure of Bitter Gourd Trypsin Inhibitor
Other atoms:
K (1);
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1vby (Na: 1) - Crystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U Mutaion, and MN2+ Bound
Other atoms:
Mn (2);
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1vc5 (Na: 2) - Crystal Structure of the Wild Type Hepatitis Delta Virus Gemonic Ribozyme Precursor, in Edta Solution
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1vct (Na: 2) - Crystal Structure of Putative Potassium Channel Related Protein From Pyrococcus Horikoshii
Other atoms:
Cl (2);
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1ve8 (Na: 1) - X-Ray Analyses of Oligonucleotides Containing 5- Formylcytosine, Suggesting A Structural Reason For Codon- Anticodon Recognition of Mitochondrial Trna-Met; Part 1, D(Cgcgaatt(F5C)Gcg)
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1vel (Na: 2) - Mycobacterium Smegmatis Dps Tetragonal Form
Other atoms:
Cd (10);
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1vi6 (Na: 10) - Crystal Structure of Ribosomal Protein S2P
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1viz (Na: 1) - Crystal Structure of An Hypothetical Protein
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1vk1 (Na: 1) - Conserved Hypothetical Protein From Pyrococcus Furiosus Pfu- 392566-001
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1vkg (Na: 2) - Crystal Structure of Human HDAC8 Complexed with Cra-19156
Other atoms:
Zn (2);
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1vlm (Na: 1) - Crystal Structure of Sam-Dependent Methyltransferase, Possible Histamine N-Methyltransferase (TM1293) From Thermotoga Maritima at 2.20 A Resolution
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1vmf (Na: 1) - Crystal Structure of A Ybjq-Like Fold Protein of Unknown Function (BH3498) From Bacillus Halodurans at 1.46 A Resolution
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1vmh (Na: 1) - Crystal Structure of Uncharacterized Conserved Protein Yjbq/UPF0047 Family, Ortholog Yugu B.Subtilis (15023806) From Clostridium Acetobutylicum at 1.31 A Resolution
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1vmj (Na: 1) - Crystal Structure of A Putative Thiamin Phosphate Synthase (TM0723) From Thermotoga Maritima MSB8 at 1.52 A Resolution
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1vq4 (Na: 86) - The Structure of the Transition State Analogue "Daa" Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
Other atoms:
Mg (117);
K (3);
Cd (5);
Cl (22);
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1vq5 (Na: 86) - The Structure of the Transition State Analogue "Raa" Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
Other atoms:
Mg (118);
K (3);
Cd (5);
Cl (22);
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1vq6 (Na: 86) - The Structure of C-Hpmn and Cca-Phe-Cap-Bio Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
Other atoms:
Mg (117);
K (2);
Cd (5);
Cl (22);
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1vq7 (Na: 86) - The Structure of the Transition State Analogue "Dca" Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
Other atoms:
Mg (118);
K (3);
Cd (5);
Cl (22);
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1vq8 (Na: 75) - The Structure of Ccda-Phe-Cap-Bio and the Antibiotic Sparsomycin Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
Other atoms:
Sr (114);
Mg (94);
K (2);
Cd (5);
Cl (22);
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1vq9 (Na: 75) - The Structure of Cca-Phe-Cap-Bio and the Antibiotic Sparsomycin Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
Other atoms:
Sr (114);
Mg (94);
K (2);
Cd (5);
Cl (22);
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1vqk (Na: 75) - The Structure of Ccda-Phe-Cap-Bio Bound to the A Site of the Ribosomal Subunit of Haloarcula Marismortui
Other atoms:
Sr (114);
Mg (93);
K (2);
Cd (5);
Cl (22);
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1vql (Na: 75) - The Structure of the Transition State Analogue "Dcsn" Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
Other atoms:
Sr (114);
Mg (94);
K (2);
Cd (5);
Cl (22);
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1vqm (Na: 75) - The Structure of the Transition State Analogue "Dan" Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
Other atoms:
Sr (114);
Mg (94);
K (2);
Cd (5);
Cl (22);
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1vqn (Na: 75) - The Structure of Cc-Hpmn and Cca-Phe-Cap-Bio Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
Other atoms:
Sr (114);
Mg (94);
K (2);
Cd (5);
Cl (22);
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1vqo (Na: 75) - The Structure of Ccpmn Bound to the Large Ribosomal Subunit Haloarcula Marismortui
Other atoms:
Sr (114);
Mg (94);
K (2);
Cd (5);
Cl (22);
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1vqp (Na: 75) - The Structure of the Transition State Analogue "Rap" Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
Other atoms:
Sr (114);
Mg (94);
K (3);
Cd (5);
Cl (22);
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1vr5 (Na: 2) - Crystal Structure of Oligopeptide Abc Transporter, Periplasmic Oligopeptide-Binding (TM1223) From Thermotoga Maritima at 1.73 A Resolution
Other atoms:
Cl (2);
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1vzq (Na: 1) - Complex of Thrombin with Designed Inhibitor 7165
Other atoms:
Ca (1);
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1w15 (Na: 2) - Rat Synaptotagmin 4 C2B Domain in the Presence of Calcium
Other atoms:
Cl (9);
Ca (3);
-
1w16 (Na: 2) - Rat Synaptotagmin 4 C2B Domain in the Absence of Calcium
Other atoms:
Cl (7);
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1w2b (Na: 86) - Trigger Factor Ribosome Binding Domain in Complex with 50S
Other atoms:
Mg (117);
K (2);
Cd (5);
Cl (22);
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1w37 (Na: 1) - 2-Keto-3-Deoxygluconate(Kdg) Aldolase of Sulfolobus Solfataricus
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1w4n (Na: 2) - Agao Covalent Complex with Tranylcypromine
Other atoms:
Cu (2);
Page generated: Thu Dec 28 11:12:46 2023
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