Atomistry » Sodium » PDB 5rdc-5syk
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Sodium in PDB, part 172 (files: 6841-6880), PDB 5rdc-5syk

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 6841-6880 (PDB 5rdc-5syk).
  1. 5rdc (Na: 1) - Pandda Analysis Group Deposition -- Endothiapepsin Ground State Model 34
  2. 5rdd (Na: 1) - Pandda Analysis Group Deposition -- Endothiapepsin Ground State Model 35
  3. 5rdf (Na: 1) - Pandda Analysis Group Deposition -- Endothiapepsin Ground State Model 37
  4. 5rdj (Na: 1) - Pandda Analysis Group Deposition -- Endothiapepsin Ground State Model 43
  5. 5rdk (Na: 1) - Pandda Analysis Group Deposition -- Endothiapepsin Ground State Model 44
  6. 5rdl (Na: 1) - Pandda Analysis Group Deposition -- Endothiapepsin Ground State Model 45
  7. 5rdn (Na: 1) - Pandda Analysis Group Deposition -- Endothiapepsin Ground State Model 47
  8. 5re3 (Na: 1) - Pandda Analysis Group Deposition -- Endothiapepsin Ground State Model 12
  9. 5sur (Na: 2) - X-Ray Crystallographic Structure of A Covalent Trimer Derived From A- Beta 17_36. Synchrotron Data Set. (Orn)Cvf(Mea)Ced(Orn)Aiigl(Orn)V.
    Other atoms: Cl (2);
  10. 5sus (Na: 1) - X-Ray Crystallographic Structure of A Covalent Trimer Derived From A- Beta 17_36. X-Ray Diffractometer Data Set. (Orn)Cvf(Mea)Ced(Orn) Aiigl(Orn)V.
    Other atoms: Cl (1);
  11. 5sv5 (Na: 3) - 1.0 Angstrom Crystal Structure of Pre-Peptidase C-Terminal Domain of Collagenase From Bacillus Anthracis.
  12. 5svj (Na: 1) - Crystal Structure of the Atp-Gated Human P2X3 Ion Channel in the Closed, Apo State
    Other atoms: Mg (1);
  13. 5svl (Na: 3) - Crystal Structure of the Atp-Gated Human P2X3 Ion Channel in the Atp- Bound, Closed (Desensitized) State
  14. 5svm (Na: 2) - Crystal Structure of the Atp-Gated Human P2X3 Ion Channel Bound to Agonist 2-Methylthio-Atp in the Desensitized State
  15. 5svp (Na: 2) - Anomalous Sulfur Signal Reveals the Position of Agonist 2-Methylthio- Atp Bound to the Atp-Gated Human P2X3 Ion Channel in the Desensitized State
  16. 5svq (Na: 1) - Crystal Structure of the Atp-Gated Human P2X3 Ion Channel Bound to Competitive Antagonist Tnp-Atp
    Other atoms: Mg (1);
  17. 5svr (Na: 1) - Crystal Structure of the Atp-Gated Human P2X3 Ion Channel Bound to Competitive Antagonist A-317491
    Other atoms: Mg (1);
  18. 5svs (Na: 1) - Anomalous MN2+ Signal Reveals A Divalent Cation-Binding Site in the Head Domain of the Atp-Gated Human P2X3 Ion Channel
    Other atoms: Mg (1);
  19. 5svt (Na: 1) - Anomalous Cs+ Signal Reveals the Site of Na+ Ion Entry to the Channel Pore of the Human P2X3 Ion Channel Through the Extracellular Fenestrations
    Other atoms: Mg (1);
  20. 5sw4 (Na: 2) - Crystal Structure of Native Catalase-Peroxidase Katg at PH8.0
    Other atoms: Fe (2);
  21. 5sw5 (Na: 2) - Crystal Structure of Native Catalase-Peroxidase Katg at PH7.5
    Other atoms: Fe (2);
  22. 5sw6 (Na: 2) - Crystal Structure of An Oxoferryl Species of Catalase-Peroxidase Katg at PH5.6
    Other atoms: Fe (2);
  23. 5swm (Na: 1) - Bacillus Halodurans Rnase H Mutant D132N in Complex with 12-Mer Frna/Dna Hybrid
    Other atoms: F (36); Br (3); Cl (1);
  24. 5swz (Na: 6) - Crystal Structure of NP1-B17 Tcr-H2DB-Np Complex
  25. 5sx0 (Na: 2) - Crystal Structure of An Oxoferryl Species of Catalase-Peroxidase Katg at PH7.5
    Other atoms: Fe (2);
  26. 5sx1 (Na: 2) - Crystal Structure of D141E Variant of B. Pseudomallei Katg
    Other atoms: Fe (2);
  27. 5sx2 (Na: 2) - Crystal Structure of the D141E Mutant of B. Pseudomallei Katg at pH 8.0.
    Other atoms: Fe (2);
  28. 5sx3 (Na: 2) - Crystal Structure of the Catalase-Peroxidase Katg of B. Pseudomaallei at pH 4.5
    Other atoms: Fe (2); Cl (2);
  29. 5sx6 (Na: 2) - Crystal Structure of the Catalase-Peroxidase Katg of B. Pseudomallei at pH 6.5
    Other atoms: Fe (2);
  30. 5sx7 (Na: 2) - Crystal Structure of Catalase-Peroxidase Katg of B. Pseudomallei at pH 8.5
    Other atoms: Fe (2);
  31. 5sxq (Na: 2) - Crystal Structure of B. Pseudomallei Katg with Isonicotinic Acid Hydrazide Bound
    Other atoms: Fe (2); Cl (2);
  32. 5sxr (Na: 2) - Crystal Structure of B. Pseudomallei Katg with Nad Bound
    Other atoms: Fe (2); Cl (2);
  33. 5sxs (Na: 2) - Crystal Structure of Catalase-Peroxidase Katg with Isonicotinic Acid Hydrazide and Amp Bound
    Other atoms: Fe (2); Cl (2);
  34. 5sxt (Na: 2) - Crystal Structure of the S324T Variant of Burkholderia Pseudomallei Katg with Isonicotinic Acid Hydrazide Bound
    Other atoms: Fe (2); Cl (2);
  35. 5sxw (Na: 2) - Crystal Structure of the E198A Variant of Catalase-Peroxidase Katg of Burkholderia Pseudomallei
    Other atoms: Fe (2);
  36. 5sxx (Na: 2) - Crystal Structure of the E198A Variant of Burkholderia Pseudomallei Catalase-Peroxidase Katg with Inh
    Other atoms: Fe (2); Cl (2);
  37. 5syh (Na: 2) - Structure of D141A Variant of B. Pseudomallei Katg
    Other atoms: Fe (2); Cl (2);
  38. 5syi (Na: 2) - Structure of D141A Variant of B. Pseudomallei Katg Complexed with Inh
    Other atoms: Fe (2); Cl (2);
  39. 5syj (Na: 2) - Crystal Structure of the D141A Variant of B. Pseudomallei Katgin Complex with Isoniazid
    Other atoms: Fe (2); Cl (2);
  40. 5syk (Na: 2) - Crystal Structure of B. Pseudomallei Katg Treated with Hydrogen Peroxide
    Other atoms: Fe (2); Cl (2);
Page generated: Sat Sep 25 14:49:11 2021

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