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Sodium in PDB 5sus: X-Ray Crystallographic Structure of A Covalent Trimer Derived From A- Beta 17_36. X-Ray Diffractometer Data Set. (Orn)Cvf(Mea)Ced(Orn) Aiigl(Orn)V.

Protein crystallography data

The structure of X-Ray Crystallographic Structure of A Covalent Trimer Derived From A- Beta 17_36. X-Ray Diffractometer Data Set. (Orn)Cvf(Mea)Ced(Orn) Aiigl(Orn)V., PDB code: 5sus was solved by A.G.Kreutzer, S.Yoo, J.S.Nowick, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.40 / 2.35
Space group P 63 2 2
Cell size a, b, c (Å), α, β, γ (°) 57.085, 57.085, 93.682, 90.00, 90.00, 120.00
R / Rfree (%) 21.9 / 27.9

Other elements in 5sus:

The structure of X-Ray Crystallographic Structure of A Covalent Trimer Derived From A- Beta 17_36. X-Ray Diffractometer Data Set. (Orn)Cvf(Mea)Ced(Orn) Aiigl(Orn)V. also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Sodium Binding Sites:

The binding sites of Sodium atom in the X-Ray Crystallographic Structure of A Covalent Trimer Derived From A- Beta 17_36. X-Ray Diffractometer Data Set. (Orn)Cvf(Mea)Ced(Orn) Aiigl(Orn)V. (pdb code 5sus). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the X-Ray Crystallographic Structure of A Covalent Trimer Derived From A- Beta 17_36. X-Ray Diffractometer Data Set. (Orn)Cvf(Mea)Ced(Orn) Aiigl(Orn)V., PDB code: 5sus:

Sodium binding site 1 out of 1 in 5sus

Go back to Sodium Binding Sites List in 5sus
Sodium binding site 1 out of 1 in the X-Ray Crystallographic Structure of A Covalent Trimer Derived From A- Beta 17_36. X-Ray Diffractometer Data Set. (Orn)Cvf(Mea)Ced(Orn) Aiigl(Orn)V.


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of X-Ray Crystallographic Structure of A Covalent Trimer Derived From A- Beta 17_36. X-Ray Diffractometer Data Set. (Orn)Cvf(Mea)Ced(Orn) Aiigl(Orn)V. within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Na101

b:68.6
occ:1.00
HG3 C:GLU7 3.2 84.0 1.0
HG2 C:GLU7 3.4 84.0 1.0
CG C:GLU7 3.7 70.0 1.0
HD3 D:ORN15 4.0 79.7 1.0
OE1 C:GLU7 4.0 54.6 1.0
CD C:GLU7 4.2 63.9 1.0
HG12 C:ILE11 4.4 70.5 1.0
HD2 D:ORN15 4.5 79.7 1.0
HD11 C:ILE11 4.6 78.2 1.0
HD13 C:ILE11 4.6 78.2 1.0
CD D:ORN15 4.7 66.4 1.0
H C:GLU7 4.8 38.0 1.0
HA C:CYS6 4.8 47.1 1.0
HN3 D:ORN15 4.9 63.2 1.0
CD1 C:ILE11 5.0 65.2 1.0

Reference:

A.G.Kreutzer, S.Yoo, R.K.Spencer, J.S.Nowick. X-Ray Crystallographic Structure of A Covalent Trimer Derived From A-Beta 17_36. X-Ray Diffractometer Data Set. (Orn)Cvf(Mea)Ced(Orn)Aiigl(Orn)V. To Be Published.
Page generated: Tue Dec 15 11:32:50 2020

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