Atomistry » Sodium » PDB 5ekm-5ez4
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Sodium in PDB, part 143 (files: 5681-5720), PDB 5ekm-5ez4

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 5681-5720 (PDB 5ekm-5ez4).
  1. 5ekm (Na: 1) - Human Carbonic Anhydrase II Complexed with A Two-Faced Guest
    Other atoms: Zn (1);
  2. 5eld (Na: 1) - Cholera Toxin Classical B-Pentamer in Complex with A Lewis-Y
  3. 5em0 (Na: 1) - Crystal Structure of Mugwort Allergen Art V 4
  4. 5emg (Na: 7) - Crystal Structures of Pna P(Gctgctgc)2 Duplex Containing T-T Mismatches
    Other atoms: Cl (14);
  5. 5en3 (Na: 1) - Crystal Structure of Human Transthyretin in Complex with Luteolin-Cl at 1.25 A Resolution
    Other atoms: Cl (2);
  6. 5en4 (Na: 1) - Complex of 17-Beta-Hydroxysteroid Dehydrogenase Type 14 with Inhibitor.
    Other atoms: F (1);
  7. 5enn (Na: 2) - The Crystal Structure of Human VPS34 in Complex with A Selective and Potent Inhibitor
  8. 5eor (Na: 1) - Structure of the Murine Antibody Fab 8E3 Bound to the Vaccinia Virus A27 Peptide 101-110
  9. 5eou (Na: 2) - Pseudomonas Aeruginosa Pilm:PILN1-12 Bound to Atp
    Other atoms: Mg (2); Cl (4);
  10. 5eoz (Na: 2) - Mutagenicity of 7-Benzyl Guanine Lesion and Replication By Human Dna Polymerase Beta
    Other atoms: F (1); Mg (2);
  11. 5ep8 (Na: 1) - X-Ray Structure of the Complex Pyrimidine-Nucleoside Phosphorylase From Bacillus Subtilis with Sulfate Ion
  12. 5epe (Na: 1) - Crystal Structure of Sam-Dependent Methyltransferase From Thiobacillus Denitrificans in Complex with S-Adenosyl-L-Homocysteine
  13. 5epu (Na: 3) - X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with Cytosine at 1.06A.
    Other atoms: Mg (7); Cl (2);
  14. 5eq3 (Na: 1) - Crystal Structure of the Srpa Adhesin From Streptococcus Sanguinis with A Sialyl Galactose Disaccharide Bound
    Other atoms: Ca (7);
  15. 5eqv (Na: 2) - 1.45 Angstrom Crystal Structure of Bifunctional 2',3'-Cyclic Nucleotide 2'-Phosphodiesterase/3'-Nucleotidase Periplasmic Precursor Protein From Yersinia Pestis with Phosphate Bound to the Active Site
    Other atoms: Fe (2);
  16. 5etk (Na: 1) - E. Coli 6-Hydroxymethyl-7,8-Dihydropterin Pyrophosphokinase Complexed with Ampcpp and Inhibitor at 1.09 Angstrom Resolution
    Other atoms: F (1); Ca (4); Cl (2);
  17. 5etm (Na: 2) - E. Coli 6-Hydroxymethyl-7,8-Dihydropterin Pyrophosphokinase Complexed with Ampcpp and Inhibitor at 1.46 Angstrom Resolution
    Other atoms: F (1); Ca (2); Cl (2);
  18. 5etn (Na: 1) - E. Coli 6-Hydroxymethyl-7,8-Dihydropterin Pyrophosphokinase Complexed with Ampcpp and Inhibitor at 1.40 Angstrom Resolution
    Other atoms: Ca (4); Cl (1);
  19. 5etp (Na: 3) - E. Coli 6-Hydroxymethyl-7,8-Dihydropterin Pyrophosphokinase Complexed with Ampcpp and Inhibitor at 1.05 Angstrom Resolution
    Other atoms: Br (1); Ca (4); Cl (1);
  20. 5etq (Na: 3) - S. Aureus 6-Hydroxymethyl-7,8-Dihydropterin Pyrophosphokinase Complexed with Ampcpp and Inhibitor at 1.96 Angstrom Resolution
    Other atoms: Mg (4);
  21. 5etr (Na: 3) - S. Aureus 6-Hydroxymethyl-7,8-Dihydropterin Pyrophosphokinase Complexed with Ampcpp and Inhibitor at 1.32 Angstrom Resolution
    Other atoms: F (2); Mg (4); Cl (2);
  22. 5ets (Na: 3) - S. Aureus 6-Hydroxymethyl-7,8-Dihydropterin Pyrophosphokinase Complexed with Ampcpp and Inhibitor at 1.95 Angstrom Resolution
    Other atoms: Mg (4); Cl (2);
  23. 5ett (Na: 3) - S. Aureus 6-Hydroxymethyl-7,8-Dihydropterin Pyrophosphokinase Complexed with Ampcpp and Inhibitor at 1.55 Angstrom Resolution
    Other atoms: F (2); Mg (4);
  24. 5eua (Na: 2) - Crystal Structure of Extended-Spectrum Beta-Lactamase Bel-1 in Complex with Moxalactam
  25. 5ev1 (Na: 2) - Structure I of Intact U2AF65 Recognizing A 3' Splice Site Signal
    Other atoms: Br (1);
  26. 5ev8 (Na: 1) - Crystal Structure of the Metallo-Beta-Lactamase Imp-1 in Complex with the Bisthiazolidine Inhibitor D-CS319
    Other atoms: Zn (8); Cl (1);
  27. 5evj (Na: 1) - X-Ray Crystal Structure of Crarsm, An Arsenic (III) S- Adenosylmethionine Methyltransferase From Chlamydomonas Reinhardtii
  28. 5ew1 (Na: 2) - Human Thrombin Sandwiched Between Two Dna Aptamers: HD22 and HD1- DELTAT3
  29. 5ew2 (Na: 3) - Human Thrombin Sandwiched Between Two Dna Aptamers: HD22 and HD1- DELTAT12
  30. 5ew6 (Na: 2) - Structure of Ligand Binding Region of Uparap at pH 7.4 Without Calcium
  31. 5ewj (Na: 2) - Crystal Structure of Amino Terminal Domains of the Nmda Receptor Subunit GLUN1 and GLUN2B in Complex with Ifenprodil
  32. 5ewl (Na: 6) - Crystal Structure of Amino Terminal Domains of the Nmda Receptor Subunit GLUN1 and GLUN2B in Complex with Mk-22
  33. 5ewm (Na: 5) - Crystal Structure of Amino Terminal Domains of the Nmda Receptor Subunit GLUN1 and GLUN2B in Complex with Evt-101
    Other atoms: F (6);
  34. 5exe (Na: 1) - Crystal Structure of Oxalate Oxidoreductase From Moorella Thermoacetica Bound with Carboxy-Tpp Adduct
    Other atoms: Mg (3); Fe (24);
  35. 5ey5 (Na: 3) - Lbcats
  36. 5ey7 (Na: 1) - Crystal Structure of Fructokinase From Vibrio Cholerae O395 in Apo Form
  37. 5eyn (Na: 1) - Crystal Structure of Fructokinase From Vibrio Cholerae O395 in Fructose, Adp, Beryllium Trifluoride and Calcium Ion Bound Form
    Other atoms: F (3); Ca (1);
  38. 5eyq (Na: 1) - Racemic Crystal Structures of Pribnow Box Consensus Promoter Sequence (Pnna)
  39. 5eyu (Na: 8) - 1.72 Angstrom Resolution Crystal Structure of Betaine Aldehyde Dehydrogenase (Betb) P449M Point Mutant From Staphylococcus Aureus in Complex with Nad+ and Bme-Modified CYS289
  40. 5ez4 (Na: 4) - 2.11 Angstrom Resolution Crystal Structure of Betaine Aldehyde Dehydrogenase (Betb) P449M/Y450L Double Mutant From Staphylococcus Aureus in Complex with Nad+ and Bme-Modified CYS289
Page generated: Fri Dec 24 09:48:14 2021

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