Sodium in PDB, part 143 (files: 5681-5720),
PDB 5en3-5f00
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 5681-5720 (PDB 5en3-5f00).
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5en3 (Na: 1) - Crystal Structure of Human Transthyretin in Complex with Luteolin-Cl at 1.25 A Resolution
Other atoms:
Cl (2);
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5en4 (Na: 1) - Complex of 17-Beta-Hydroxysteroid Dehydrogenase Type 14 with Inhibitor.
Other atoms:
F (1);
-
5enn (Na: 2) - The Crystal Structure of Human VPS34 in Complex with A Selective and Potent Inhibitor
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5eor (Na: 1) - Structure of the Murine Antibody Fab 8E3 Bound to the Vaccinia Virus A27 Peptide 101-110
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5eou (Na: 2) - Pseudomonas Aeruginosa Pilm:PILN1-12 Bound to Atp
Other atoms:
Mg (2);
Cl (4);
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5eoz (Na: 2) - Mutagenicity of 7-Benzyl Guanine Lesion and Replication By Human Dna Polymerase Beta
Other atoms:
F (1);
Mg (2);
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5ep8 (Na: 1) - X-Ray Structure of the Complex Pyrimidine-Nucleoside Phosphorylase From Bacillus Subtilis with Sulfate Ion
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5epe (Na: 1) - Crystal Structure of Sam-Dependent Methyltransferase From Thiobacillus Denitrificans in Complex with S-Adenosyl-L-Homocysteine
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5epu (Na: 3) - X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with Cytosine at 1.06A.
Other atoms:
Mg (7);
Cl (2);
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5eq3 (Na: 1) - Crystal Structure of the Srpa Adhesin From Streptococcus Sanguinis with A Sialyl Galactose Disaccharide Bound
Other atoms:
Ca (7);
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5eqv (Na: 2) - 1.45 Angstrom Crystal Structure of Bifunctional 2',3'-Cyclic Nucleotide 2'-Phosphodiesterase/3'-Nucleotidase Periplasmic Precursor Protein From Yersinia Pestis with Phosphate Bound to the Active Site
Other atoms:
Fe (2);
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5etk (Na: 1) - E. Coli 6-Hydroxymethyl-7,8-Dihydropterin Pyrophosphokinase Complexed with Ampcpp and Inhibitor at 1.09 Angstrom Resolution
Other atoms:
F (1);
Ca (4);
Cl (2);
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5etm (Na: 2) - E. Coli 6-Hydroxymethyl-7,8-Dihydropterin Pyrophosphokinase Complexed with Ampcpp and Inhibitor at 1.46 Angstrom Resolution
Other atoms:
F (1);
Ca (2);
Cl (2);
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5etn (Na: 1) - E. Coli 6-Hydroxymethyl-7,8-Dihydropterin Pyrophosphokinase Complexed with Ampcpp and Inhibitor at 1.40 Angstrom Resolution
Other atoms:
Ca (4);
Cl (1);
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5etp (Na: 3) - E. Coli 6-Hydroxymethyl-7,8-Dihydropterin Pyrophosphokinase Complexed with Ampcpp and Inhibitor at 1.05 Angstrom Resolution
Other atoms:
Br (1);
Ca (4);
Cl (1);
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5etq (Na: 3) - S. Aureus 6-Hydroxymethyl-7,8-Dihydropterin Pyrophosphokinase Complexed with Ampcpp and Inhibitor at 1.96 Angstrom Resolution
Other atoms:
Mg (4);
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5etr (Na: 3) - S. Aureus 6-Hydroxymethyl-7,8-Dihydropterin Pyrophosphokinase Complexed with Ampcpp and Inhibitor at 1.32 Angstrom Resolution
Other atoms:
F (2);
Mg (4);
Cl (2);
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5ets (Na: 3) - S. Aureus 6-Hydroxymethyl-7,8-Dihydropterin Pyrophosphokinase Complexed with Ampcpp and Inhibitor at 1.95 Angstrom Resolution
Other atoms:
Mg (4);
Cl (2);
-
5ett (Na: 3) - S. Aureus 6-Hydroxymethyl-7,8-Dihydropterin Pyrophosphokinase Complexed with Ampcpp and Inhibitor at 1.55 Angstrom Resolution
Other atoms:
F (2);
Mg (4);
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5eua (Na: 2) - Crystal Structure of Extended-Spectrum Beta-Lactamase Bel-1 in Complex with Moxalactam
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5ev1 (Na: 2) - Structure I of Intact U2AF65 Recognizing A 3' Splice Site Signal
Other atoms:
Br (1);
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5ev8 (Na: 1) - Crystal Structure of the Metallo-Beta-Lactamase Imp-1 in Complex with the Bisthiazolidine Inhibitor D-CS319
Other atoms:
Zn (8);
Cl (1);
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5evj (Na: 1) - X-Ray Crystal Structure of Crarsm, An Arsenic (III) S- Adenosylmethionine Methyltransferase From Chlamydomonas Reinhardtii
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5ew1 (Na: 2) - Human Thrombin Sandwiched Between Two Dna Aptamers: HD22 and HD1- DELTAT3
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5ew2 (Na: 3) - Human Thrombin Sandwiched Between Two Dna Aptamers: HD22 and HD1- DELTAT12
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5ew6 (Na: 2) - Structure of Ligand Binding Region of Uparap at pH 7.4 Without Calcium
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5ewj (Na: 2) - Crystal Structure of Amino Terminal Domains of the Nmda Receptor Subunit GLUN1 and GLUN2B in Complex with Ifenprodil
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5ewl (Na: 6) - Crystal Structure of Amino Terminal Domains of the Nmda Receptor Subunit GLUN1 and GLUN2B in Complex with Mk-22
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5ewm (Na: 5) - Crystal Structure of Amino Terminal Domains of the Nmda Receptor Subunit GLUN1 and GLUN2B in Complex with Evt-101
Other atoms:
F (6);
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5exe (Na: 1) - Crystal Structure of Oxalate Oxidoreductase From Moorella Thermoacetica Bound with Carboxy-Tpp Adduct
Other atoms:
Mg (3);
Fe (24);
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5ey5 (Na: 3) - Lbcats
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5ey7 (Na: 1) - Crystal Structure of Fructokinase From Vibrio Cholerae O395 in Apo Form
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5eyn (Na: 1) - Crystal Structure of Fructokinase From Vibrio Cholerae O395 in Fructose, Adp, Beryllium Trifluoride and Calcium Ion Bound Form
Other atoms:
F (3);
Ca (1);
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5eyq (Na: 1) - Racemic Crystal Structures of Pribnow Box Consensus Promoter Sequence (Pnna)
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5eyu (Na: 8) - 1.72 Angstrom Resolution Crystal Structure of Betaine Aldehyde Dehydrogenase (Betb) P449M Point Mutant From Staphylococcus Aureus in Complex with Nad+ and Bme-Modified CYS289
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5ez4 (Na: 4) - 2.11 Angstrom Resolution Crystal Structure of Betaine Aldehyde Dehydrogenase (Betb) P449M/Y450L Double Mutant From Staphylococcus Aureus in Complex with Nad+ and Bme-Modified CYS289
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5ezb (Na: 1) - Chicken Prestin Stas Domain
Other atoms:
Zn (2);
-
5ezx (Na: 2) - Crystal Structure of Bace-1 in Complex with {(1R,2R)-2-[(R)-2-Amino-4- (4-Difluoromethoxy-Phenyl)-4,5-Dihydro-Oxazol-4-Yl]-Cyclopropyl}-(5- Chloro-Pyridin-3-Yl)-Methanone
Other atoms:
F (2);
Cl (1);
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5ezz (Na: 2) - Crystal Structure of Bace-1 in Complex with (4S)-4-[3-(5-Chloro-3- Pyridyl)Phenyl]-4-[4-(Difluoromethoxy)-3-Methyl-Phenyl]-5H-Oxazol-2- Amine
Other atoms:
F (2);
Cl (1);
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5f00 (Na: 2) - Crystal Structure of Bace-1 in Complex with 5-[3-[(3-Chloro-8- Quinolyl)Amino]Phenyl]-5-Methyl-2,6-Dihydro-1,4-Oxazin-3-Amine
Other atoms:
Cl (1);
Page generated: Thu Dec 28 11:22:08 2023
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