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Sodium in PDB, part 84 (files: 3321-3360), PDB 3u0a-3upw

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 3321-3360 (PDB 3u0a-3upw).
  1. 3u0a (Na: 3) - Crystal Structure of An Acyl-Coa Thioesterase II TESB2 From Mycobacterium Marinum
  2. 3u0b (Na: 1) - Crystal Structure of An Oxidoreductase From Mycobacterium Smegmatis
  3. 3u0e (Na: 2) - Crystal Structure of Beta-Ketoacyl Synthase From Brucella Melitensis in Complex with Fragment 9320
    Other atoms: Cl (1);
  4. 3u0f (Na: 1) - The Structure of Beta-Ketoacyl Synthase From Brucella Melitensis Bound to the Fragment 7-Hydroxycoumarin
    Other atoms: Cl (2);
  5. 3u0s (Na: 2) - Crystal Structure of An Enzyme Redesigned Through Multiplayer Online Gaming: CE6
  6. 3u13 (Na: 1) - Crystal Structure of De Novo Design of Cystein Esterase ECH13 at the Resolution 1.6A, Northeast Structural Genomics Consortium Target OR51
    Other atoms: Mg (1);
  7. 3u18 (Na: 4) - Chicago Sky Blue 6B, A Novel Inhibitor For Macrophage Migration Inhibitory Factor
  8. 3u1o (Na: 4) - Three Dimensional Structure of De Novo Designed Cysteine Esterase ECH19, Northeast Structural Genomics Consortium Target OR49
  9. 3u21 (Na: 1) - Crystal Structure of A Fragment of Nuclear Factor Related to Kappa-B- Binding Protein (Residues 370-495) (Nfrkb) From Homo Sapiens at 2.18 A Resolution
  10. 3u27 (Na: 3) - Crystal Structure of Ethanolamine Utilization Protein Eutl From Leptotrichia Buccalis C-1013-B
    Other atoms: Ca (4);
  11. 3u4m (Na: 5) - Crystal Structure of Ribosomal Protein TTHL1 in Complex with 80NT 23S Rna From Thermus Thermophilus
    Other atoms: Mg (5); Cl (2);
  12. 3u69 (Na: 1) - Unliganded Wild-Type Human Thrombin
    Other atoms: I (1); Cl (1);
  13. 3u8e (Na: 2) - Crystal Structure of Cysteine Protease From Bulbs of Crocus Sativus at 1.3 A Resolution
  14. 3u8i (Na: 4) - Functionally Selective Inhibition of Group Iia Phospholipase A2 Reveals A Role For Vimentin in Regulating Arachidonic Acid Metabolism
    Other atoms: Br (2); Ca (4); Cl (4);
  15. 3u8o (Na: 1) - Human Thrombin Complexed with D-Phe-Pro-D-Arg-D-Thr
    Other atoms: I (1); Cl (1);
  16. 3u8r (Na: 1) - Human Thrombin Complexed with D-Phe-Pro-D-Arg-Ile
    Other atoms: I (1); Cl (1);
  17. 3u8t (Na: 1) - Human Thrombin Complexed with D-Phe-Pro-D-Arg-Cys
    Other atoms: I (1); Cl (1);
  18. 3u98 (Na: 2) - Human Thrombin in Complex with MI001
  19. 3u9a (Na: 2) - Human Thrombin in Complex with MI330
    Other atoms: Cl (2);
  20. 3ua6 (Na: 3) - Crystal Structure of the Human Fyn SH3 Domain
  21. 3ua7 (Na: 1) - Crystal Structure of the Human Fyn SH3 Domain in Complex with A Peptide From the Hepatitis C Virus NS5A-Protein
    Other atoms: Cl (1); Zn (2);
  22. 3ucy (Na: 1) - Structure of MG2+ Bound N-Terminal Domain of Calmodulin in the Presence of ZN2+
    Other atoms: Mg (1); Zn (2); As (1);
  23. 3ud2 (Na: 17) - Crystal Structure of Selenomethionine ZU5A-ZU5B Protein Domains of Human Erythrocyte Ankyrin
    Other atoms: Cl (1);
  24. 3ue9 (Na: 2) - Crystal Structure of Adenylosuccinate Synthetase (Ampsase) (Pura) From Burkholderia Thailandensis
    Other atoms: Ca (2);
  25. 3ues (Na: 2) - Crystal Structure of Alpha-1,3/4-Fucosidase From Bifidobacterium Longum Subsp. Infantis Complexed with Deoxyfuconojirimycin
  26. 3uet (Na: 2) - Crystal Structure of Alpha-1,3/4-Fucosidase From Bifidobacterium Longum Subsp. Infantis D172A/E217A Mutant Complexed with Lacto-N- Fucopentaose II
  27. 3uf4 (Na: 1) - Crystal Structure of A SH3 and SH2 Domains of Fyn Protein (Proto- Concogene Tyrosine-Protein Kinase Fyn) From Mus Musculus at 1.98 A Resolution
    Other atoms: Cl (2);
  28. 3ug3 (Na: 1) - Crystal Structure of Alpha-L-Arabinofuranosidase From Thermotoga Maritima Ligand Free Form
  29. 3ugx (Na: 2) - Crystal Structure of S-Arrestin
    Other atoms: K (1);
  30. 3ui5 (Na: 2) - Crystal Structure of Human Parvulin 14
  31. 3ui6 (Na: 2) - 0.89 A Resolution Crystal Structure of Human Parvulin 14 in Complex with Oxidized Dtt
  32. 3ul5 (Na: 1) - Saccharum Officinarum Canecystatin-1 in Space Group C2221
  33. 3umb (Na: 1) - Crystal Structure of the L-2-Haloacid Dehalogenase RSC1362
    Other atoms: Mg (2); K (2); Cl (3);
  34. 3umc (Na: 2) - Crystal Structure of the L-2-Haloacid Dehalogenase PA0810
    Other atoms: Cl (4);
  35. 3umj (Na: 2) - Crystal Structure of D311E Lipase
    Other atoms: Zn (2); Ca (2); Cl (2);
  36. 3umy (Na: 1) - Crystal Structure of Mutant Ribosomal Protein T217A TTHL1 in Complex with 80NT 23S Rna From Thermus Thermophilus
    Other atoms: Mg (4); Cl (2);
  37. 3unx (Na: 1) - Bond Length Analysis of Asp, Glu and His Residues in Subtilisin Carlsberg at 1.26A Resolution
    Other atoms: Ca (2);
  38. 3uoy (Na: 2) - Crystal Structure of Otemo Complex with Fad and Nadp (Form 1)
  39. 3upq (Na: 1) - Crystal Structure of the Pre-Catalytic Ternary Complex of Polymerase Lambda with An Ratp Analog Opposite A Templating T.
    Other atoms: Mn (3);
  40. 3upw (Na: 4) - Pichia Stipitis OYE2.6 Complexed with Nicotinamide
Page generated: Fri Dec 24 09:43:46 2021

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