Sodium in PDB, part 304 (files: 12121-12160),
PDB 9icm-9mva
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 12121-12160 (PDB 9icm-9mva).
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9icm (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Six Base Pairs of Double Stranded Dna (No 5'-Phosphate)
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9icn (Na: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex + 2',3'- Dideoxycytidine-5'-Triphosphate, Soaked in the Presence of Ddctp and MGCL2
Other atoms:
Mg (1);
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9ico (Na: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex, Soaked in the Presence of Dttp and MGCL2
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9icp (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Six Base Pairs of Dna; Soaked in the Presence of Pyrophosphate (1 Millimolar) and MGCL2 (5 Millimolar)
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9icq (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Six Base Pairs of Dna; Soaked in the Presence of Datp (1 Millimolar) and MNCL2 (5 Millimolar)
Other atoms:
Mn (2);
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9icr (Na: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex + 2'- Deoxycytidine-5'-Triphosphate, Soaked in the Presence of Dctp and MNCL2
Other atoms:
Mn (2);
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9ics (Na: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex + 2',3'- Dideoxycytidine-5'-Triphosphate, Soaked in the Presence of Ddctp and MNCL2
Other atoms:
Mn (2);
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9ict (Na: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex + 2'- Deoxyguanosine-5'-Triphosphate, Soaked in the Presence of Dgtp and MNCL2
Other atoms:
Mn (2);
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9icu (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Six Base Pairs of Dna; Soaked in the Presence of Dttp (1 Millimolar) and MNCL2 (5 Millimolar)
Other atoms:
Mn (1);
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9icv (Na: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex + 2'- Deoxyadenosine-5'-Triphosphate, Soaked in the Presence of Datp and ZNCL2
Other atoms:
Zn (3);
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9icw (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Six Base Pairs of Dna; Native Structure
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9icx (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Six Base Pairs of Dna (Non Gapped Dna Only)
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9icy (Na: 2) - Dna Polymerase Beta (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna (Non Gapped Dna Only)
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9jfb (Na: 1) - Crystal Structure of L-Threonine-O-3-Phosphate Decarboxylase Cobc
Other atoms:
Cl (4);
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9jff (Na: 1) - Crystal Structure of L-Threonine-O-3-Phosphate Decarboxylase Cobc in Complex with Reaction Intermediate
Other atoms:
Cl (3);
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9jiu (Na: 18) - Ferritin Mutant R63MEHIS
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9jqb (Na: 24) - Cryo-Em Structure of Ferritin Variant R63BRTHA/E67BRTHA
Other atoms:
Br (48);
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9k72 (Na: 5) - Crystal Structure of Tsabgl Using Merged Datasets
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9k73 (Na: 3) - Crystal Structure of Tsabgl
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9k8x (Na: 1) - Crystal Structure of the Calcium Indicator GCAMP6S-Brus-145 in Calcium-Bounded State
Other atoms:
Ca (4);
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9k9z (Na: 1) - Room-Temperature Structure of Lysozyme Determined By Serial Synchrotron Crystallography (Mosflm)
Other atoms:
Cl (2);
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9ka0 (Na: 1) - Room-Temperature Structure of Lysozyme Determined By Serial Synchrotron Crystallography (Xgandalf)
Other atoms:
Cl (2);
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9kot (Na: 1) - Hewl Crystal Soaked in Buffer of PH2.0
Other atoms:
Cl (2);
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9kx8 (Na: 1) - Mistletoe Lectin I From Viscum Album Complexed with Epimer Form of Lactose
Other atoms:
Cl (2);
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9lmk (Na: 1) - Room Temperature Structure of Lysozyme By Serial Synchrotron Crystallography (Xds)
Other atoms:
Cl (2);
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9lml (Na: 1) - Room Temperature Structure of Lysozyme By Serial Synchrotron Crystallography (Mosflm)
Other atoms:
Cl (2);
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9ls8 (Na: 2) - Crystal Structure of Peptidyl-Trna Hydrolase From Enterococcus Faecium at 1.22 A
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9mm2 (Na: 3) - Crystal Structure of Bacterial Pectin Methylesterase PMEC5 From B. Fibrisolvens D1T
Other atoms:
Mg (3);
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9mt1 (Na: 1) - 1.53 A Crystal Structure of Housefly Cytochrome C at pH 6.5
Other atoms:
Fe (2);
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9mva (Na: 14) - Mycobacterium Abscessus EIS2 in Complex with Non-Hydrolyzable Coenzymea
Other atoms:
Cl (6);
Page generated: Tue Feb 25 11:44:00 2025
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