Sodium in PDB, part 295 (files: 11761-11800),
PDB 8yrc-9dk4
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 11761-11800 (PDB 8yrc-9dk4).
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8yrc (Na: 1) - Chlorinated Yabj From Staphylococcus Aureus
Other atoms:
Cl (1);
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8ysv (Na: 2) - Crystal Structure of Beta - Glucosidase 6PG From Enterococcus Faecalis
Other atoms:
Ni (1);
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8z2x (Na: 1) - Crystal Structure of Exo-Beta-(1,3)-Glucanase From Aspergillus Oryzae (Aobgl) As A Complex with Cellobiose
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8z2y (Na: 1) - High-Resolution Crystal Structure of Exo-Beta-(1,3)-Glucanase From Aspergillus Oryzae (Aobgl) As A Complex with Glucose
Other atoms:
Cl (1);
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8z62 (Na: 2) - Crystal Structure of Rrna (Uracil-C5)-Methyltransferase From Pyrococcus Horikoshii OT3
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8z76 (Na: 1) - The Structure of Thiocyanate Dehydrogenase From Pelomicrobium Methylotrophicum (Pmtcdh), Activated By Crystals Soaking with 1 Mm CUCL2 During 6 Months
Other atoms:
Cu (13);
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8zhy (Na: 2) - Magnesium Substituted Terephthalate 1,2-Cis- Dihydrodioldehydrogenase/Decarboxylase in Complex with CO2.
Other atoms:
Mg (2);
Zn (3);
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8zj7 (Na: 1) - Terephthalate 1,2-Cis-Dihydrodioldehydrogenase/Decarboxylase in Complex with 3,4-Dihydroxybenzoate and Nad.
Other atoms:
Cl (1);
Zn (4);
Mg (1);
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8zmn (Na: 1) - Crystal Structure of ANTXR1
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8zmu (Na: 1) - Glutamate Dehydrogenase (W89F-Mutant) From Thermococcus Profundus in the Unliganded State
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8zpb (Na: 2) - Cryo-Em Structure of Human Norepinephrine Transporter Net Bound with Norepinephrine in An Occluded State at A Resolution of 2.6 Angstrom
Other atoms:
Cl (1);
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8zqo (Na: 2) - Human High-Affinity Choline Transporter CHT1 Bound to Hc-3 Under Nacl Condition, with Sodium and Chloride Ions Coordinated.
Other atoms:
Cl (1);
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8zqq (Na: 1) - Human High-Affinity Choline Transporter CHT1 Bound to Choline Under Nacl Condition, with Sodium and Chloride Ions Coordinated.
Other atoms:
Cl (1);
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8zyj (Na: 1) - Cryo-Em Structure of Human Testis-Specific Na+,K+-Atpase ALPHA4 in Ouabain-Bound Form
Other atoms:
F (3);
Mg (1);
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9avk (Na: 1) - Structure of Long Rib Domain From Limosilactobacillus Reuteri
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9b1u (Na: 2) - Crystal Structure of Pqqt with Pqq Bound
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9b1z (Na: 2) - Crystal Structure of Adp-Ribose Diphosphatase From Klebsiella Pneumoniae (Apo)
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9b74 (Na: 7) - Crystal Structure of Humanized 44H10 Fab Version 14
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9b7c (Na: 1) - High-Resolution Ambient Temperature Structure of Lysozyme Soaked with Sodium Iodide
Other atoms:
I (3);
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9b7e (Na: 4) - S_SAD Structure of Hewl Using Lossy Compression Data with A Compression Ratio of 422
Other atoms:
Cl (8);
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9b7f (Na: 4) - S_SAD Structure of Hewl Using Lossless Default Compression
Other atoms:
Cl (8);
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9b8u (Na: 2) - Crystal Structure of Crx-RET4 Oligonucleotide Complex
Other atoms:
As (2);
K (3);
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9bcz (Na: 1) - Chicken 1-Phosphatidylinositol 4,5-Bisphosphate Phosphodiesterase Zeta-1 (PLCZ1) in Complex with Calcium and Phosphorylated Threonine
Other atoms:
Cl (2);
Ca (1);
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9bfj (Na: 1) - Cryo-Em Structure of Human CHT1 in the Choline Bound State
Other atoms:
Cl (1);
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9bnh (Na: 2) - X-Ray Crystal Structure of Cu-TZ4H Tryptophan Zipper Metallo-Peptide
Other atoms:
Cu (2);
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9bs5 (Na: 2) - Bacteroides Ovatus GH97C Sus
Other atoms:
Ca (2);
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9bw8 (Na: 1) - Structure of P450BLT From Micromonospora Sp. Mw-13 in Complex with Fluorinated Biarylitide
Other atoms:
F (16);
Fe (3);
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9c6e (Na: 1) - High-Resolution Structure of Bovine (3-367)Arrestin-1 in A Pre- Activated Conformation
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9c6k (Na: 2) - Cryo-Em Structure of the Tpp Riboswitch Embedded in An Rna Scaffold Bound to Thiamine Pyrophosphate
Other atoms:
Mg (6);
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9c6l (Na: 5) - Yasminevirus C12ORF29, A 5' to 3' Rna Ligase
Other atoms:
Mg (6);
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9c74 (Na: 3) - Superfolder Green Fluorescent Protein with Meta-Nitro-Tyrosine Incorporated at Position 66
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9c7a (Na: 2) - Crystal Structure of R149W Neurodevelopmental Disease-Associated U2AF2 Variant
Other atoms:
Br (1);
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9cgs (Na: 1) - Structure of Human Mait A-F7 Tcr in Complex with Human MR1-Pyridoxal- 5'-Phosphate
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9cip (Na: 7) - Microed Structure of the C11 Cysteine Protease Clostripain
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9crn (Na: 1) - Crystal Structure of Streptococcus Pyogenes Tgla
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9dam (Na: 1) - A Darpin Fused to the 1TEL Crystallization Chaperone Via A Direct Helical Fusion
Other atoms:
Cl (3);
Mg (2);
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9db5 (Na: 8) - A Darpin Fused to the 1TEL Crystallization Chaperone Via A Proline- Alanine Linker
Other atoms:
Cl (1);
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9dk1 (Na: 1) - Lexapeptide Dehydratase Complex Lxmky Apo
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9dk3 (Na: 1) - Lexapeptide Dehydratase Complex Lxmky, Hydrolysed Atp Bound
Other atoms:
Mg (2);
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9dk4 (Na: 7) - Ancestral Hydroxynitrile Lyase with Fifteen Substitutions
Page generated: Sun Dec 15 11:44:23 2024
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