Sodium in PDB 8u36: The Crystal Structure of the Classical Binding Interface of Importin Alpha 2 and A Nuclear Localisation Signal Sequence in Frog Siadenovirus Core Protein VII

The structure of The Crystal Structure of the Classical Binding Interface of Importin Alpha 2 and A Nuclear Localisation Signal Sequence in Frog Siadenovirus Core Protein VII, PDB code: 8u36 was solved by A.Athukorala, C.M.Donnelly, J.K.Forwood, S.Sarker, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.90 / 2.60
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	77.287, 89.291, 95.803, 90, 90, 90
R / Rfree (%)	21.8 / 24.2

The binding sites of Sodium atom in the The Crystal Structure of the Classical Binding Interface of Importin Alpha 2 and A Nuclear Localisation Signal Sequence in Frog Siadenovirus Core Protein VII (pdb code 8u36). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total 2 binding sites of Sodium where determined in the The Crystal Structure of the Classical Binding Interface of Importin Alpha 2 and A Nuclear Localisation Signal Sequence in Frog Siadenovirus Core Protein VII, PDB code: 8u36:
Jump to Sodium binding site number: 1; 2;

Sodium binding site 1 out of 2 in the The Crystal Structure of the Classical Binding Interface of Importin Alpha 2 and A Nuclear Localisation Signal Sequence in Frog Siadenovirus Core Protein VII


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of The Crystal Structure of the Classical Binding Interface of Importin Alpha 2 and A Nuclear Localisation Signal Sequence in Frog Siadenovirus Core Protein VII within 5.0Å range:

Sodium binding site 2 out of 2 in the The Crystal Structure of the Classical Binding Interface of Importin Alpha 2 and A Nuclear Localisation Signal Sequence in Frog Siadenovirus Core Protein VII


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 2 of The Crystal Structure of the Classical Binding Interface of Importin Alpha 2 and A Nuclear Localisation Signal Sequence in Frog Siadenovirus Core Protein VII within 5.0Å range: probe atom residue distance (Å) B Occ A:Na602 b:73.2 occ:1.00 HB3 A:GLU456 3.4 118.8 1.0 HB2 A:LEU460 3.8 114.4 1.0 HE1 A:MET463 3.9 126.2 1.0 HG11 A:VAL417 4.2 84.2 1.0 CB A:GLU456 4.3 99.0 1.0 HB2 A:GLU456 4.3 118.8 1.0 HB3 A:LYS459 4.3 110.9 1.0 HG12 A:VAL414 4.4 80.5 1.0 HG12 A:VAL417 4.4 84.2 1.0 HD12 A:LEU460 4.4 112.1 1.0 O A:GLU456 4.5 100.8 1.0 HE2 A:MET463 4.5 126.2 1.0 HB2 A:ALA451 4.5 107.6 1.0 CE A:MET463 4.6 105.2 1.0 HE2 A:HIS418 4.6 96.1 1.0 HA A:LEU460 4.7 114.9 1.0 CB A:LEU460 4.7 95.3 1.0 HG3 A:LYS459 4.7 129.1 1.0 H A:LEU460 4.7 119.2 1.0 CG1 A:VAL417 4.7 70.2 1.0 OE2 A:GLU456 4.7 117.0 1.0 CD A:GLU456 4.8 115.4 1.0 HG2 A:LYS459 4.8 129.1 1.0 HE3 A:MET463 4.8 126.2 1.0 HB A:VAL417 4.8 82.0 1.0 HB1 A:ALA451 4.9 107.6 1.0 HG21 A:VAL417 4.9 78.2 1.0 N A:LEU460 4.9 99.3 1.0 CG A:GLU456 5.0 101.0 1.0 HD22 A:LEU460 5.0 108.8 1.0

A.Athukorala, C.M.Donnelly, J.K.Forwood, S.Sarker. Structural and Functional Characterization of Nuclear Localization Signals of Pvii Protein of Frog Siadenovirus To Be Published.