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Sodium in PDB, part 276 (files: 11001-11040), PDB 8cty-8d5d

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 11001-11040 (PDB 8cty-8d5d).
  1. 8cty (Na: 1) - 12-Mer Dna Structure of Exbim Bound to Rnase-H
    Other atoms: Cl (1);
  2. 8ctz (Na: 1) - 12-Mer Dna Structure of Exbim & O6ME-G Bound to Rnase-H
    Other atoms: K (2);
  3. 8cu0 (Na: 4) - 12-Mer Dna Structure of Exbim Bound to Rnaseh -Modified Ddd
  4. 8cu7 (Na: 1) - Crystal Structure of A2AAR-STAR2-Bril in Complex with A Novel A2A Antagonist, Lj-4517
    Other atoms: F (3);
  5. 8cv2 (Na: 6) - Human Excitatory Amino Acid Transporter 3 (EAAT3) in An Outward Facing Sodium-Bound State
  6. 8cv3 (Na: 2) - Human Excitatory Excitatory Amino Acid Transporter 3 (EAAT3) Protomer at in An Intermediate Outward Facing Sodium-Bound State
  7. 8cvu (Na: 1) - 20NS Temperature-Jump (Light) Xfel Structure of Lysozyme
    Other atoms: Cl (5);
  8. 8cvv (Na: 1) - 20NS Temperature-Jump (DARK1) Xfel Structure of Lysozyme
    Other atoms: Cl (5);
  9. 8cvw (Na: 1) - 20NS Temperature-Jump (DARK2) Xfel Structure of Lysozyme
    Other atoms: Cl (5);
  10. 8cw0 (Na: 1) - 20US Temperature-Jump (Light) Xfel Structure of Lysozyme
    Other atoms: Cl (5);
  11. 8cw1 (Na: 1) - 20US Temperature-Jump (DARK1) Xfel Structure of Lysozyme
    Other atoms: Cl (5);
  12. 8cw3 (Na: 1) - 20US Temperature-Jump (DARK2) Xfel Structure of Lysozyme
    Other atoms: Cl (5);
  13. 8cw5 (Na: 1) - 200US Temperature-Jump (Light) Xfel Structure of Lysozyme
    Other atoms: Cl (5);
  14. 8cw6 (Na: 1) - 200US Temperature-Jump (DARK1) Xfel Structure of Lysozyme
    Other atoms: Cl (5);
  15. 8cw7 (Na: 1) - 200US Temperature-Jump (DARK2) Xfel Structure of Lysozyme
    Other atoms: Cl (5);
  16. 8cw8 (Na: 1) - Laser Off Temperature-Jump Xfel Structure of Lysozyme
    Other atoms: Cl (5);
  17. 8cwb (Na: 2) - Laser Off Temperature-Jump Xfel Structure of Lysozyme Bound to N,N'- Diacetylchitobiose
    Other atoms: Cl (5);
  18. 8cwc (Na: 2) - 20NS Temperature-Jump (Light) Xfel Structure of Lysozyme Bound to N, N'-Diacetylchitobiose
    Other atoms: Cl (5);
  19. 8cwd (Na: 2) - 20NS Temperature-Jump (DARK1) Xfel Structure of Lysozyme Bound to N, N'-Diacetylchitobiose
    Other atoms: Cl (5);
  20. 8cwe (Na: 2) - 20NS Temperature-Jump (DARK2) Xfel Structure of Lysozyme Bound to N, N'-Diacetylchitobiose
    Other atoms: Cl (5);
  21. 8cwf (Na: 2) - 200US Temperature-Jump (Light) Xfel Structure of Lysozyme Bound to N, N'-Diacetylchitobiose
    Other atoms: Cl (5);
  22. 8cwg (Na: 2) - 200US Temperature-Jump (DARK1) Xfel Structure of Lysozyme Bound to N, N'-Diacetylchitobiose
    Other atoms: Cl (5);
  23. 8cwh (Na: 2) - 200US Temperature-Jump (DARK2) Xfel Structure of Lysozyme Bound to N, N'-Diacetylchitobiose
    Other atoms: Cl (5);
  24. 8cwp (Na: 1) - X-Ray Crystal Structure of Nthi Protein D Bound to A Putative Glycerol Moiety
  25. 8cx5 (Na: 1) - Crystal Structure of Small Molecule Alpha,Beta-Ketoamide 4 Covalently Bound to K-Ras(G12R)
    Other atoms: Cl (2); F (2); Mg (2);
  26. 8cx9 (Na: 2) - Structure of the Sars-COV2 Plpro (C111S) in Complex with A Dimeric Ubv That Inhibits Activity By An Unusual Allosteric Mechanism
    Other atoms: Br (6); Cl (1); Zn (4);
  27. 8cza (Na: 2) - Crystal Structure of the First Bromodomain (BD1) of Human Brdt Bound to Gxh-IV-075
    Other atoms: F (6); Cl (3);
  28. 8d28 (Na: 4) - Crystal Structure of Theophylline Aptamer in Complex with Theophylline
    Other atoms: Mg (5);
  29. 8d29 (Na: 1) - Crystal Structure of Theophylline Aptamer - Apo Form
    Other atoms: K (5);
  30. 8d2a (Na: 4) - Crystal Structure of Theophylline Aptamer in Complex with TAL3
    Other atoms: Mg (2);
  31. 8d2b (Na: 4) - Crystal Structure of Theophylline Aptamer in Complex with TAL2
    Other atoms: Mg (5);
  32. 8d2s (Na: 1) - Zebrafish MFSD2A Isoform B in Inward Open Ligand Bound Conformation
  33. 8d2u (Na: 1) - Zebrafish MFSD2A Isoform B in Inward Open Ligand 1A Conformation
  34. 8d2v (Na: 1) - Zebrafish MFSD2A Isoform B in Inward Open Ligand 1B Conformation
  35. 8d38 (Na: 2) - Structure of A Purine Nucleoside Phosphorylase From Geobacillus Stearothermophilus
  36. 8d40 (Na: 3) - Crystal Structure of Human CELSR1 EC1-4
    Other atoms: Ca (15);
  37. 8d4i (Na: 2) - Structure of Y430F D-Ornithine/D-Lysine Decarboxylase Complex with Putrescine
    Other atoms: Cl (2);
  38. 8d4o (Na: 4) - Crystal Structure of the Neutrophil Serine Protease Inhibitor EAP1 From S. Aureus
  39. 8d4t (Na: 1) - Mammalian Civ with Gdn Bound
    Other atoms: Mg (1); Zn (1); Cu (3); Fe (2);
  40. 8d5d (Na: 2) - Structure of Y430F D-Ornithine/D-Lysine Decarboxylase Complex with D- Arginine
Page generated: Tue Feb 25 11:41:44 2025

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