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Sodium in PDB, part 270 (files: 10761-10800), PDB 8byk-8cps

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 10761-10800 (PDB 8byk-8cps).
  1. 8byk (Na: 2) - The Structure of Madc From Clostridium Maddingley Reveals New Insights Into Class I Lanthipeptide Cyclases
    Other atoms: Zn (1); Cl (1);
  2. 8c0g (Na: 1) - Sars-Cov NSP16-NSP10 Complexed with N7-Gtp
    Other atoms: Zn (2);
  3. 8c25 (Na: 1) - Purine Nucleoside Phosphorylase in Complex with Js-375
    Other atoms: Cl (7);
  4. 8c4d (Na: 3) - N-Acetylmuramoyl-L-Alanine Amidase From Enterococcus Faecium Prophage Genome
    Other atoms: Zn (1); Cl (4);
  5. 8c4n (Na: 1) - Cdaa-Amp Complex
    Other atoms: Cl (2);
  6. 8c56 (Na: 1) - Cpg Specific M.Mpei Methyltransferase Crystallized in the Presence of 2'-Deoxy-5-Methylzebularine (5MZ) and 5-Methylcytosine Containing Dsdna
  7. 8c59 (Na: 1) - Cpg Specific M.Mpei Methyltransferase Crystallized in the Presence of 5-Bromocytosine (Converted to 5MC) and 5-Methylcytosine Containing Dsdna
  8. 8c5d (Na: 11) - Glutathione Transferase P1-1 From Mus Musculus
    Other atoms: Cl (1); Ca (4);
  9. 8c61 (Na: 2) - Structure of USP54 in Complex with LYS63-Linked Diubiquitin-Pa
    Other atoms: Zn (12); Cl (2);
  10. 8c6g (Na: 4) - Crystal Structure of Odorant Binding Protein 4 From Anopheles Gambiae (AGAMOBP4) at pH 6.5
  11. 8c6o (Na: 2) - Crystal Structure of H64F Obelin Mutant From Obelia Longissima at 2.2 Angstrom Resolution
  12. 8c75 (Na: 3) - Pbp Acca From A. Tumefaciens BO542 in Apoform 3
  13. 8c9e (Na: 3) - Priestia Megaterium Mupirocin-Sensitive Isoleucyl-Trna Synthetase 1 Complexed with An Isoleucyl-Adenylate Analogue
    Other atoms: Cl (4); Zn (1);
  14. 8c9f (Na: 4) - Priestia Megaterium Inactive High Motif Mutant of TYPE1 Isoleucyl-Trna Synthetase Complexed with An Isoleucyl-Adenylate Analogue.
    Other atoms: Cl (4); Zn (1);
  15. 8c9g (Na: 3) - Priestia Megaterium Mupirocin-Sensitive Isoleucyl-Trna Synthetase 1 Complexed with Mupirocin
    Other atoms: Cl (4); Zn (2);
  16. 8can (Na: 3) - Cryo-Em Structure of the Cora Homohexamer From Galleria Mellonella Saliva
    Other atoms: Cu (24);
  17. 8cay (Na: 2) - Pbp Acca From A. Tumefaciens BO542 in Complex with Agrocinopine D-Like
  18. 8cb4 (Na: 2) - The Transcriptional Regulator Prfa From Listeria Monocytogenes in Complex with Tripeptide Leu-Leu-Leu
  19. 8cb5 (Na: 2) - The Transcriptional Regulator Prfa From Listeria Monocytogenes in Complex with Tripeptide Glu-Val-Phe
  20. 8cb8 (Na: 2) - The Transcriptional Regulator Prfa From Listeria Monocytogenes in Complex with Tetrapeptide Ser-Thr-Leu-Leu
  21. 8cbi (Na: 2) - The Transcriptional Regulator Prfa From Listeria Monocytogenes in Complex with Tetrapeptide Thr-Lys-Pro-Arg
  22. 8cc3 (Na: 1) - Vibrio Cholerae Gbpa (Lpmo Domain)
    Other atoms: Cu (2); Zn (7);
  23. 8cc5 (Na: 1) - Vibrio Cholerae Gbpa (Lpmo Domain)
    Other atoms: Cu (2); Zn (8);
  24. 8cf7 (Na: 2) - Dimethylated Rsl-R5 in Complex with Cucurbit[7]Uril, C121 Sheet Assembly
  25. 8cgs (Na: 1) - Crystal Structure of Arsenite Oxidase From Alcaligenes Faecalis (Af Aio) Bound to Antimony Oxyanion
    Other atoms: Cl (5); Fe (20); Mo (4); Sb (4);
  26. 8cha (Na: 1) - Fc Gamma Riia 27W/131H Variant Ectodomain
  27. 8cic (Na: 1) - Crystal Structure of Stabilized A2A Adenosine Receptor A2AR-STAR2-Bril in Complex with Clinical Candidate Etrumadenant
  28. 8cih (Na: 1) - Structure of Fl Cinp
  29. 8cix (Na: 5) - Dna-Polymerase Sliding Clamp (Dnan) From Escherichia Coli in Complex with Griselimycin.
    Other atoms: Ca (7); Mg (4);
  30. 8ciy (Na: 1) - Dna-Polymerase Sliding Clamp (Dnan) From Escherichia Coli in Complex with Cyclohexyl-Griselimycin.
    Other atoms: Ca (6); Mg (5);
  31. 8cjb (Na: 1) - A268M Variant of the Codh/Acs Complex of C. Hydrogenoformans
    Other atoms: Ni (3); Fe (14);
  32. 8cjc (Na: 1) - F515A Variant of the Codh/Acs Complex of C. Hydrogenoformans
    Other atoms: Fe (14); Ni (3);
  33. 8ck2 (Na: 1) - MUC2 CYSD1 G1352S
    Other atoms: Ca (2);
  34. 8cl5 (Na: 2) - Lysozyme in Matrix of Lipidic Cubic Phase of Monoolein (Lcp)
    Other atoms: Cl (2);
  35. 8cl6 (Na: 2) - Lysozyme in Matrix of Hydroxyethylcellulose (Hec)
    Other atoms: Cl (3);
  36. 8cmw (Na: 1) - A225L Variant of the Codh/Acs Complex of C. Hydrogenoformans
    Other atoms: Ni (3); Fe (14);
  37. 8cod (Na: 2) - Crystal Structure of S-Adenosyl-L-Homocysteine Hydrolase From Mus Musculus in Complex with Inosine
  38. 8cpm (Na: 24) - Human Apoferritin After 405 Nm Laser Exposure
    Other atoms: Mg (14);
  39. 8cpr (Na: 1) - G13D Mutant of KRAS4B (2-169) Bound to Gdp with the Switch-I in Fully Open Conformation Crystallized in Sodium Potassium Phosphate Buffer
  40. 8cps (Na: 24) - Human Apoferritin
    Other atoms: Mg (14);
Page generated: Sun Dec 15 11:42:50 2024

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