Sodium in PDB 2p1f: Human Ump Synthase (C-Terminal Domain-Orotidine 5'-Monophosphate Decarboxylase)

The structure of Human Ump Synthase (C-Terminal Domain-Orotidine 5'-Monophosphate Decarboxylase), PDB code: 2p1f was solved by Y.Liu, H.L.Tang, E.F.Pai, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	65.09 / 1.76
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	78.314, 116.875, 61.946, 90.00, 90.00, 90.00
R / Rfree (%)	13.9 / 17.1

The binding sites of Sodium atom in the Human Ump Synthase (C-Terminal Domain-Orotidine 5'-Monophosphate Decarboxylase) (pdb code 2p1f). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Human Ump Synthase (C-Terminal Domain-Orotidine 5'-Monophosphate Decarboxylase), PDB code: 2p1f:

Sodium binding site 1 out of 1 in the Human Ump Synthase (C-Terminal Domain-Orotidine 5'-Monophosphate Decarboxylase)


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Human Ump Synthase (C-Terminal Domain-Orotidine 5'-Monophosphate Decarboxylase) within 5.0Å range: probe atom residue distance (Å) B Occ A:Na1001 b:2.0 occ:1.00 O A:HOH2032 3.0 12.7 1.0 O A:HOH2066 3.1 10.9 1.0 O A:HOH2057 3.1 15.0 1.0 NZ A:LYS125 3.2 8.3 1.0 O A:HOH2086 3.5 17.0 1.0 CE A:LYS125 3.6 9.4 1.0 C1 A:GOL2000 3.7 12.1 1.0 CG A:PRO228 3.9 9.6 1.0 CB A:PRO228 4.2 9.3 1.0 O1 A:GOL2000 4.4 11.7 1.0 CE A:MET182 4.5 11.4 1.0 OD2 A:ASP123 4.6 7.9 1.0 C3 A:GOL2000 4.9 14.2 1.0 C2 A:GOL2000 5.0 12.4 1.0

Y.Liu, H.L.Tang, E.F.Pai. Human Ump Synthase (C-Terminal Domain-Orotidine 5'-Monophosphate Decarboxylase) To Be Published.