Atomistry » Sodium » PDB 2qd8-2r22 » 2qwn
Atomistry »
  Sodium »
    PDB 2qd8-2r22 »
      2qwn »

Sodium in PDB 2qwn: Crystal Structure of Disulfide-Bond-Crosslinked Complex of Bovine HSC70 (1-386AA)R171C and Bovine Auxilin (810-910AA)D876C in the Adp*Pi State

Enzymatic activity of Crystal Structure of Disulfide-Bond-Crosslinked Complex of Bovine HSC70 (1-386AA)R171C and Bovine Auxilin (810-910AA)D876C in the Adp*Pi State

All present enzymatic activity of Crystal Structure of Disulfide-Bond-Crosslinked Complex of Bovine HSC70 (1-386AA)R171C and Bovine Auxilin (810-910AA)D876C in the Adp*Pi State:
3.1.3.48;

Protein crystallography data

The structure of Crystal Structure of Disulfide-Bond-Crosslinked Complex of Bovine HSC70 (1-386AA)R171C and Bovine Auxilin (810-910AA)D876C in the Adp*Pi State, PDB code: 2qwn was solved by J.Jiang, E.G.Maes, L.Wang, A.B.Taylor, A.P.Hinck, E.M.Lafer, R.Sousa, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.71 / 2.40
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 38.627, 58.262, 225.929, 90.00, 90.00, 90.00
R / Rfree (%) 20.8 / 27.9

Other elements in 2qwn:

The structure of Crystal Structure of Disulfide-Bond-Crosslinked Complex of Bovine HSC70 (1-386AA)R171C and Bovine Auxilin (810-910AA)D876C in the Adp*Pi State also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Sodium Binding Sites:

The binding sites of Sodium atom in the Crystal Structure of Disulfide-Bond-Crosslinked Complex of Bovine HSC70 (1-386AA)R171C and Bovine Auxilin (810-910AA)D876C in the Adp*Pi State (pdb code 2qwn). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total 2 binding sites of Sodium where determined in the Crystal Structure of Disulfide-Bond-Crosslinked Complex of Bovine HSC70 (1-386AA)R171C and Bovine Auxilin (810-910AA)D876C in the Adp*Pi State, PDB code: 2qwn:
Jump to Sodium binding site number: 1; 2;

Sodium binding site 1 out of 2 in 2qwn

Go back to Sodium Binding Sites List in 2qwn
Sodium binding site 1 out of 2 in the Crystal Structure of Disulfide-Bond-Crosslinked Complex of Bovine HSC70 (1-386AA)R171C and Bovine Auxilin (810-910AA)D876C in the Adp*Pi State


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Disulfide-Bond-Crosslinked Complex of Bovine HSC70 (1-386AA)R171C and Bovine Auxilin (810-910AA)D876C in the Adp*Pi State within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na489

b:17.7
occ:1.00
O A:HOH507 2.6 29.4 1.0
O3B A:ADP487 2.6 36.3 1.0
O A:TYR15 2.6 39.5 1.0
OD2 A:ASP10 2.7 45.6 1.0
O A:HOH597 2.7 18.4 1.0
O A:HOH530 2.8 27.9 1.0
O3A A:ADP487 3.2 42.0 1.0
PB A:ADP487 3.3 40.9 1.0
CG A:ASP10 3.4 41.6 1.0
O1B A:ADP487 3.5 38.5 1.0
OD1 A:ASP10 3.6 44.4 1.0
C A:TYR15 3.7 39.5 1.0
PA A:ADP487 3.8 42.5 1.0
O1A A:ADP487 3.8 40.7 1.0
MG A:MG491 3.9 33.4 1.0
CA A:GLY12 4.0 37.3 1.0
O2A A:ADP487 4.0 42.6 1.0
CB A:TYR15 4.5 39.7 1.0
CA A:TYR15 4.5 39.0 1.0
N A:GLY12 4.6 37.0 1.0
N A:TYR15 4.6 39.1 1.0
N A:SER16 4.6 39.8 1.0
O A:HOH505 4.7 27.8 1.0
O A:ASP366 4.7 31.8 1.0
O2B A:ADP487 4.7 40.0 1.0
CB A:ASP10 4.7 38.5 1.0
CA A:SER16 4.7 39.4 1.0
O A:HOH508 4.7 29.9 1.0
O A:HOH601 4.8 22.7 1.0
O2 A:PO4488 4.8 25.9 1.0
O A:ASP10 5.0 36.0 1.0

Sodium binding site 2 out of 2 in 2qwn

Go back to Sodium Binding Sites List in 2qwn
Sodium binding site 2 out of 2 in the Crystal Structure of Disulfide-Bond-Crosslinked Complex of Bovine HSC70 (1-386AA)R171C and Bovine Auxilin (810-910AA)D876C in the Adp*Pi State


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 2 of Crystal Structure of Disulfide-Bond-Crosslinked Complex of Bovine HSC70 (1-386AA)R171C and Bovine Auxilin (810-910AA)D876C in the Adp*Pi State within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na490

b:16.0
occ:1.00
O4 A:PO4488 2.7 26.3 1.0
OG1 A:THR204 2.8 38.1 1.0
OD2 A:ASP206 2.8 38.0 1.0
O A:THR204 2.9 37.2 1.0
OD1 A:ASP199 3.3 41.4 1.0
O A:HOH601 3.3 22.7 1.0
CG A:ASP199 3.4 39.1 1.0
C A:THR204 3.6 37.1 1.0
OD2 A:ASP199 3.6 39.8 1.0
O A:ASP199 3.6 39.1 1.0
P A:PO4488 3.8 29.2 1.0
CB A:THR204 3.8 36.9 1.0
CG A:ASP206 3.9 38.4 1.0
O1 A:PO4488 4.0 26.5 1.0
N A:GLY201 4.0 35.5 1.0
MG A:MG491 4.0 33.4 1.0
CB A:ASP199 4.1 38.8 1.0
C A:ASP199 4.1 38.3 1.0
O3 A:PO4488 4.1 21.9 1.0
O A:HOH511 4.3 24.8 1.0
CA A:THR204 4.3 36.8 1.0
N A:PHE205 4.3 36.9 1.0
O A:HOH547 4.3 35.1 1.0
N A:ASP206 4.3 38.2 1.0
CB A:ASP206 4.4 38.4 1.0
O A:HOH525 4.4 36.4 1.0
CA A:GLY201 4.5 34.4 1.0
CA A:PHE205 4.5 37.4 1.0
C A:PHE205 4.7 38.0 1.0
N A:LEU200 4.7 38.0 1.0
CA A:ASP199 4.7 38.9 1.0
C A:LEU200 4.8 36.8 1.0
CA A:LEU200 4.8 37.6 1.0
N A:THR204 4.8 36.4 1.0
OD1 A:ASP206 4.9 40.6 1.0
O2B A:ADP487 5.0 40.0 1.0

Reference:

J.Jiang, E.G.Maes, A.B.Taylor, L.Wang, A.P.Hinck, E.M.Lafer, R.Sousa. Structural Basis of J Cochaperone Binding and Regulation of HSP70. Mol.Cell V. 28 422 2007.
ISSN: ISSN 1097-2765
PubMed: 17996706
DOI: 10.1016/J.MOLCEL.2007.08.022
Page generated: Mon Oct 7 04:04:51 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy