Sodium in PDB, part 310 (files: 12361-12400),
PDB 9j7m-9kmi
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 12361-12400 (PDB 9j7m-9kmi).
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9j7m (Na: 1) - Cryo-Em Structure of Taut
Other atoms:
Cl (1);
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9j8c (Na: 2) - Human Glycine Transporter 1 in the Sarcosine-Bound State with An Occluded Conformation
Other atoms:
Cl (1);
-
9jaw (Na: 1) - Crystal Structure of Nad-Dependent Methanol Dehydrogenases 2 From Bacillus Methanolicus MGA3
Other atoms:
Mn (10);
-
9jcz (Na: 2) - Cryo-Em Structure of Human Taut in Presence of Taurine, Determined in An Inward-Facing Occluded Conformation
Other atoms:
Cl (1);
-
9jd4 (Na: 2) - Taurine Transporter
Other atoms:
Cl (1);
-
9jd5 (Na: 2) - Cryo-Em Structure of Human Taut in Presence of Taurocyamine, Determined in An Inward-Facing Occluded Conformation
Other atoms:
Cl (1);
-
9jd9 (Na: 2) - Taurine Transporter
Other atoms:
Cl (1);
-
9jda (Na: 2) - Taurine Transporter
Other atoms:
Cl (1);
-
9jen (Na: 2) - Chito Oligosaccharide Deacetylase From Vibrio Campbellii (Vhcod) Complex Tetraacetyl-Chitotetraose Oligosaccharide (Glcnac)4
Other atoms:
Zn (2);
-
9jeo (Na: 3) - Chito Oligosaccharide Deacetylase From Vibrio Campbellii (Vhcod) in Complex with N-Acetyl-Beta-D-Glucosaminyl-1,4-D- Glucosaminium(Glcnacglcn)
Other atoms:
Zn (4);
-
9jfb (Na: 1) - Crystal Structure of L-Threonine-O-3-Phosphate Decarboxylase Cobc
Other atoms:
Cl (4);
-
9jff (Na: 1) - Crystal Structure of L-Threonine-O-3-Phosphate Decarboxylase Cobc in Complex with Reaction Intermediate
Other atoms:
Cl (3);
-
9jgp (Na: 4) - Structure of Pd Ions Bound to Human Heavy Chain Ferritin Nanocage.
Other atoms:
Pd (2);
Mg (4);
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9jiu (Na: 18) - Ferritin Mutant R63MEHIS
-
9jln (Na: 1) - Cryo-Em Structure of Human Taut in Presence of Taurine, Observed Only One Sodium Ion, Determined in An Inward-Occluded Conformation
Other atoms:
Cl (1);
-
9jm1 (Na: 2) - Crystal Structure of De Novo Designed Light-Responsive Oligomer C2-5 (Lro-C2-5)
-
9jm4 (Na: 1) - Crystal Structure of De Novo Designed Light-Responsive Oligomer C3-7 (Lro-C3-7)
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9jqb (Na: 24) - Cryo-Em Structure of Ferritin Variant R63BRTHA/E67BRTHA
Other atoms:
Br (48);
-
9jt0 (Na: 3) - Chito Oligosaccharide Deacetylase From Vibrio Campbellii (Vhcod) Complex with Chitobiose
Other atoms:
Zn (3);
-
9k0n (Na: 2) - Cryo-Em Structure of Human Taurine Transporter Taut Bound with Beta- Alanine in An Occluded State
Other atoms:
Cl (1);
-
9k1b (Na: 2) - Cryo-Em Structure of Human Taurine Transporter Taut Bound with Taurine in An Occluded State
Other atoms:
Cl (1);
-
9k1f (Na: 1) - Cryo-Em Structure of Human Taurine Transporter Taut Bound with Gaba in An Intermediate Conformation in the Transport Cycle
Other atoms:
Cl (1);
-
9k1x (Na: 2) - Cryo-Em Structure of Human Taurine Transporter Taut Bound with Ges in An Occluded State
Other atoms:
Cl (1);
-
9k72 (Na: 5) - Crystal Structure of Tsabgl Using Merged Datasets
-
9k73 (Na: 3) - Crystal Structure of Tsabgl
-
9k7b (Na: 1) - Cryo-Em Structure of Human Taurine Transporter Taut Bound with Taurine Molecules in An Inward-Open State in the Saposin-Disc
Other atoms:
Cl (1);
-
9k8x (Na: 1) - Crystal Structure of the Calcium Indicator GCAMP6S-Brus-145 in Calcium-Bounded State
Other atoms:
Ca (4);
-
9k9z (Na: 1) - Room-Temperature Structure of Lysozyme Determined By Serial Synchrotron Crystallography (Mosflm)
Other atoms:
Cl (2);
-
9ka0 (Na: 1) - Room-Temperature Structure of Lysozyme Determined By Serial Synchrotron Crystallography (Xgandalf)
Other atoms:
Cl (2);
-
9kbr (Na: 4) - Crystal Structure of the Methyltransferase-Ribozyme 1 Bound to Dna Substrate (with 1-Methyl-Adenosine)
-
9kcg (Na: 3) - Cryo-Em Structure of Human Sodium Pump Wt in (3NA+)E1-Amppcp State
Other atoms:
Mg (1);
-
9kcj (Na: 2) - Cryo-Em Structure of Human Sodium Pump E1003 in (3NA+)E1-Amppcp State
-
9kcl (Na: 2) - Cryo-Em Structure of Human Sodium Pump E1003K Complexed with NDRG3 in (2NA+)E1-Amppcp State
-
9kcm (Na: 2) - Cryo-Em Structure of Human Sodium Pump E1003K Complexed with NDRG3 and TMX2 in (2NA+)E1-Amppcp State
-
9kcq (Na: 3) - Crystal Structure of An Ankyrin Protein in Complex with G-Quadruplex
-
9kcr (Na: 1) - Cryo-Em Structure of Human Sodium Pump E1003K Complexed with NDRG3 in (2NA+)E1 State
-
9kfd (Na: 2) - Truncated FZO1,Gtp-Bound
Other atoms:
Mg (2);
-
9kh4 (Na: 1) - Crystal Structure of Galectin-8 N-Crd with N-Acetyllactosamine
Other atoms:
Ni (1);
-
9km3 (Na: 3) - Cryo-Em Structure of Glycine Transporter 2 in Complex with Substrate Glycine
Other atoms:
Cl (1);
-
9kmi (Na: 2) - Taurine Bound Mtaut
Other atoms:
Cl (1);
Page generated: Mon Dec 15 11:19:01 2025
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