Sodium in PDB, part 310 (files: 12361-12400),
PDB 9mp3-9qge
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 12361-12400 (PDB 9mp3-9qge).
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9mp3 (Na: 1) - Mix & Quench Time Resolved Lysozyme - NAG1 Complex (0 Ms)
Other atoms:
Cl (4);
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9mp4 (Na: 1) - Mix & Quench Time Resolved Lysozyme - NAG1 Complex (8 Ms)
Other atoms:
Cl (4);
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9mp5 (Na: 1) - Mix & Quench Time Resolved Lysozyme - NAG1 Complex (50 Ms)
Other atoms:
Cl (4);
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9mp6 (Na: 1) - Mix & Quench Time Resolved Lysozyme - NAG1 Complex (150 Ms)
Other atoms:
Cl (4);
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9mp7 (Na: 1) - Mix & Quench Time Resolved Lysozyme - NAG1 Complex (300 Ms)
Other atoms:
Cl (4);
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9mp8 (Na: 1) - Mix & Quench Time Resolved Lysozyme - NAG1 Complex (750 Ms)
Other atoms:
Cl (4);
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9mp9 (Na: 1) - Mix & Quench Time Resolved Lysozyme - NAG1 Complex (1000 Ms)
Other atoms:
Cl (4);
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9mpa (Na: 1) - Mix & Quench Time Resolved Lysozyme - NAG1 Complex (2000 Ms)
Other atoms:
Cl (4);
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9mt1 (Na: 1) - 1.53 A Crystal Structure of Housefly Cytochrome C at pH 6.5
Other atoms:
Fe (2);
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9mva (Na: 14) - Mycobacterium Abscessus EIS2 in Complex with Non-Hydrolyzable Coenzymea
Other atoms:
Cl (6);
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9mw5 (Na: 6) - D1 Herpes Virus Simplex Neutralizing Nanobody Bound to Hsv Glycoprotein Gb
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9mwy (Na: 2) - Crystal Structure of the Dna Binding Domain of FLI1 in Complex with A Dna Containing Four Contiguous Ggaa Sites
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9mxc (Na: 3) - Cryo-Em Structure of Human Enterovirus D68 Usa/Il/14-18952 in Complex with Fc-MFSD6(L3)
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9n6n (Na: 1) - Room Temperature X-Ray Structure of Sars-Cov-2 Main Protease Mutant D48Y, P168 Deletion in Complex with Pomotrelvir
Other atoms:
Cl (1);
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9n6p (Na: 1) - Room Temperature X-Ray Structure of Sars-Cov-2 Main Protease Mutant D48Y, P168 Deletion in Complex with Ensitrelvir
Other atoms:
Cl (1);
F (3);
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9n6r (Na: 1) - Room Temperature X-Ray Structure of Sars-Cov-2 Main Protease in Complex with Ensitrelvir
Other atoms:
Cl (1);
F (3);
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9nc2 (Na: 2) - Structure of HPK1 with Compound C3
Other atoms:
F (4);
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9ngc (Na: 2) - ELIC5 with Propylamine Facing Ecd Outwards in Liposomes with 2:1:1 Popc:Pope:Popg
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9nge (Na: 1) - The Ubiquitin-Associated Domain of Human Thirty-Eight Negative Kinase- 1 Rigidly Fused to A Double Trigger Variant of the 1TEL Crystallization Chaperone
Other atoms:
K (4);
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9ngf (Na: 5) - Elic Facing Ecd Outwards in Liposomes with 2:1:1 Popc:Pope:Popg
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9ngg (Na: 7) - Elic Facing Ecd Inwards in Liposomes with 2:1:1 Popc:Pope:Popg
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9ngi (Na: 9) - ELIC5 with Propylamine Facing Ecd Inwards in Liposomes with 2:1:1 Popc:Pope:Popg
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9ngq (Na: 6) - Elic State 1 with Propylamine Facing Ecd Outwards in Liposomes with 2:1:1 Popc:Pope:Popg
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9ngr (Na: 6) - Elic State 2 with Propylamine Facing Ecd Outwards in Liposomes with 2:1:1 Popc:Pope:Popg
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9ngs (Na: 4) - Elic with Propylamine Facing Ecd Inwards in Liposomes with 2:1:1 Popc:Pope:Popg
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9nh3 (Na: 6) - Helicobacter Pylori Strain SS1 Kata
Other atoms:
Fe (2);
Cl (1);
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9nsm (Na: 12) - Crystal Structure of the Bat Rotavirus Apo P[10] VP8* Receptor Binding Domain at 1.85 Angstrom Resolution
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9oh9 (Na: 16) - Human Stomatin Complex in Native Membrane Vesicles
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9orv (Na: 1) - X-Ray Diffraction Structure of Lysozyme Co-Crystallized with N,N',N"- Triacetylchitotriose
Other atoms:
Cl (2);
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9orw (Na: 1) - X-Ray Diffraction Structure of Apo-Form Lysozyme
Other atoms:
Cl (2);
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9orz (Na: 1) - Microed Structure of Apo-Form Lysozyme
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9os0 (Na: 1) - Microed Structure of Lysozyme Complexed with N,N',N"- Triacetylchitotriose From Cocktail-Soaked Crystals
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9os1 (Na: 1) - Microed Structure of Lysozyme Co-Crystallized with N,N',N"- Triacetylchitotriose
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9ow2 (Na: 2) - Crystal Structure of the Surface Protein (CD630_07380) From Clostridium Difficile Strain 630
Other atoms:
Cl (8);
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9p0f (Na: 4) - Crystal Structure of the C-Terminal Cytoplasmic Domain of NSP4 From Sars-Cov-2
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9p4z (Na: 2) - Human EAAT3 with Sodium Bound at Inward Facing State
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9p6b (Na: 2) - Cryo-Em Structure of Full-Length Human TRPV1 in the Presence of Alpha- Humulene
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9pl2 (Na: 1) - Crystal Structure of A Snoal-Like Domain-Containing Protein From Mycobacterium Ulcerans
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9qgb (Na: 2) - Crystal Structure of An Nadh-Accepting Ene Reductase Variant NOSTOCER1-L1,5 (Engineered Loop Swap From Achromobacter Sp. JA81)
Other atoms:
Cl (2);
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9qge (Na: 1) - Crystal Structure of An Nadh-Accepting Ene Reductase Variant NOSTOCER1-L1,5 Mutant D352K
Other atoms:
Cl (2);
Page generated: Mon Aug 18 17:26:37 2025
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