Atomistry » Sodium » PDB 8zm7-9c1d
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Sodium in PDB, part 302 (files: 12041-12080), PDB 8zm7-9c1d

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 12041-12080 (PDB 8zm7-9c1d).
  1. 8zm7 (Na: 1) - Engineering Omega-Amine Transaminase For Extending Substrate Scope By Ancestral Sequence Reconstruction
    Other atoms: Cl (26);
  2. 8zmn (Na: 1) - Crystal Structure of ANTXR1
  3. 8zmu (Na: 1) - Glutamate Dehydrogenase (W89F-Mutant) From Thermococcus Profundus in the Unliganded State
  4. 8znz (Na: 2) - CD73 Bound with HB0045
    Other atoms: Ca (2); Zn (4);
  5. 8zpb (Na: 2) - Cryo-Em Structure of Human Norepinephrine Transporter Net Bound with Norepinephrine in An Occluded State at A Resolution of 2.6 Angstrom
    Other atoms: Cl (1);
  6. 8zqo (Na: 2) - Human High-Affinity Choline Transporter CHT1 Bound to Hc-3 Under Nacl Condition, with Sodium and Chloride Ions Coordinated.
    Other atoms: Cl (1);
  7. 8zqq (Na: 1) - Human High-Affinity Choline Transporter CHT1 Bound to Choline Under Nacl Condition, with Sodium and Chloride Ions Coordinated.
    Other atoms: Cl (1);
  8. 8zst (Na: 1) - Lysozyme Crystallized with Bioassembler on Earth
    Other atoms: Gd (4); Cl (7);
  9. 8zsu (Na: 1) - Lysozyme Crystallized with Bioassembler in Space Microgravity
    Other atoms: Gd (4); Cl (7);
  10. 8ztb (Na: 1) - Crystal Structure of Active Site Influencing Variant (F218Y) of Imp-1 Metallo-Beta-Lactamase.
    Other atoms: Cl (4); Zn (4);
  11. 8zxi (Na: 16) - Peptide Channel Interactions in the Truncated Vhchip Nanopore
  12. 8zyj (Na: 1) - Cryo-Em Structure of Human Testis-Specific Na+,K+-Atpase ALPHA4 in Ouabain-Bound Form
    Other atoms: F (3); Mg (1);
  13. 8zyv (Na: 2) - Bacterial Flagellar Sodium-Driven Stator POMA5POMB2 with 100 Mm Nacl
  14. 8zyz (Na: 2) - Bacterial Flagellar Sodium-Driven Stator POMA5POMB2(D24N) with 100 Mm Nacl
  15. 9ar6 (Na: 2) - Cryoem Structure of THERMOCAS9 in Pre-Cleavage State Bound with the Dna Containing Nnnncca Pam
  16. 9avk (Na: 1) - Structure of Long Rib Domain From Limosilactobacillus Reuteri
  17. 9azg (Na: 1) - Native Nnha in H32
  18. 9azh (Na: 3) - Native Nnha in P1
    Other atoms: Cl (2);
  19. 9b01 (Na: 1) - Catalytic Mutant C357A Nnha in Ches Buffer
    Other atoms: Cl (2);
  20. 9b02 (Na: 1) - Nnha C357A Catalytic Mutant in Tris Buffer
    Other atoms: Cl (1);
  21. 9b1u (Na: 2) - Crystal Structure of Pqqt with Pqq Bound
  22. 9b1z (Na: 2) - Crystal Structure of Adp-Ribose Diphosphatase From Klebsiella Pneumoniae (Apo)
  23. 9b74 (Na: 7) - Crystal Structure of Humanized 44H10 Fab Version 14
  24. 9b7c (Na: 1) - High-Resolution Ambient Temperature Structure of Lysozyme Soaked with Sodium Iodide
    Other atoms: I (3);
  25. 9b7e (Na: 4) - S_SAD Structure of Hewl Using Lossy Compression Data with A Compression Ratio of 422
    Other atoms: Cl (8);
  26. 9b7f (Na: 4) - S_SAD Structure of Hewl Using Lossless Default Compression
    Other atoms: Cl (8);
  27. 9b8u (Na: 2) - Crystal Structure of Crx-RET4 Oligonucleotide Complex
    Other atoms: As (2); K (3);
  28. 9bcz (Na: 1) - Chicken 1-Phosphatidylinositol 4,5-Bisphosphate Phosphodiesterase Zeta-1 (PLCZ1) in Complex with Calcium and Phosphorylated Threonine
    Other atoms: Cl (2); Ca (1);
  29. 9bfj (Na: 1) - Cryo-Em Structure of Human CHT1 in the Choline Bound State
    Other atoms: Cl (1);
  30. 9bj5 (Na: 1) - Crystal Structure of the Hepn Family Member Abiv (P212121 Space Group)
    Other atoms: Br (3);
  31. 9bnh (Na: 2) - X-Ray Crystal Structure of Cu-TZ4H Tryptophan Zipper Metallo-Peptide
    Other atoms: Cu (2);
  32. 9bps (Na: 2) - Plasmodium Falciparum Apicoplast Dna Polymerase Mutant - K417M
    Other atoms: Cl (4);
  33. 9bs5 (Na: 2) - Bacteroides Ovatus GH97C Sus
    Other atoms: Ca (2);
  34. 9btx (Na: 2) - Structure of Human Mait A-F7 Tcr in Complex with Human MR1-3,4- Dihydroxybenzaldehyde
  35. 9btz (Na: 1) - Structure of Human Mait A-F7 Tcr in Complex with Human MR1- Nicotinaldehyde
  36. 9bw8 (Na: 1) - Structure of P450BLT From Micromonospora Sp. Mw-13 in Complex with Fluorinated Biarylitide
    Other atoms: F (16); Fe (3);
  37. 9by5 (Na: 4) - Crystal Structure of Rt-Phyr (RUTHE_01174)
    Other atoms: Mg (3);
  38. 9c0e (Na: 2) - Phosphorylated Human NKCC1_K289NA492E in Complex with Furosemide
    Other atoms: K (2); Cl (4); Mg (2);
  39. 9c0h (Na: 2) - Phosphorylated Human NKCC1 in Complex with Bumetanide
    Other atoms: K (2); Cl (2);
  40. 9c1d (Na: 1) - Mycobaterium Tuberculosis PKS13 Acyltransferase Incubated with Dmso
    Other atoms: Cl (6);
Page generated: Sat Aug 23 06:32:51 2025

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