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Sodium in PDB, part 240 (files: 9561-9600), PDB 7d5x-7e1z

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 9561-9600 (PDB 7d5x-7e1z).
  1. 7d5x (Na: 4) - Bovine Heart Cytochrome C Oxidase in A Catalytic Intermediate, IO10, at 1.74 Angstrom Resolution
    Other atoms: Zn (2); Mg (2); Fe (4); Cu (6);
  2. 7d78 (Na: 1) - The Structure of Thioesterase Dcsb
    Other atoms: Cl (2);
  3. 7d79 (Na: 1) - The Structure of Dcsb Complex with Its Substrate Analogue
    Other atoms: Cl (4);
  4. 7d93 (Na: 2) - Crystal Structure of the Na+,K+-Atpase in the E2P State with Bound MG2+ and Anthroylouabain (P2(1)2(1)2(1) Symmetry)
    Other atoms: Mg (4);
  5. 7d94 (Na: 2) - Crystal Structure of the Na+,K+-Atpase in the E2P State with Bound One MG2+ and One Rb+ in the Presence of Bufalin
    Other atoms: Mg (4); Rb (2);
  6. 7dci (Na: 1) - Crystal Structure of HSF2 Dna-Binding Domain in Complex with 2-Site Hse Dna in the Head-to-Head Orientation
  7. 7dcj (Na: 2) - Crystal Structure of HSF1 Dna-Binding Domain in Complex with 2-Site Hse Dna in the Head-to-Head Orientation
  8. 7dcs (Na: 5) - Crystal Structure of HSF1 Dna-Binding Domain in Complex with 3-Site Hse Dna (23 Bp)
  9. 7dct (Na: 2) - Crystal Structure of HSF1 Dna-Binding Domain in Complex with 3-Site Hse Dna (24 Bp)
  10. 7dcu (Na: 3) - Crystal Structure of HSF2 Dna-Binding Domain in Complex with 3-Site Hse Dna (21 Bp)
  11. 7ddf (Na: 2) - Crystal Structures of Na+,K+-Atpase in Complex with Beryllium Fluoride
    Other atoms: F (6); Mg (4);
  12. 7ddh (Na: 2) - Crystal Structures of Na+,K+-Atpase in Complex with Digoxin
    Other atoms: Mg (4);
  13. 7ddi (Na: 2) - Crystal Structures of Na+,K+-Atpase in Complex with Digitoxin
    Other atoms: Mg (4);
  14. 7ddk (Na: 2) - Crystal Structures of Na+,K+-Atpase in Complex with Rostafuroxin
    Other atoms: Mg (4);
  15. 7ddl (Na: 2) - Crystal Structures of Na+,K+-Atpase in Complex with Bufalin
    Other atoms: Mg (4);
  16. 7deq (Na: 1) - Lysozyme-Sugar Complex in D2O
    Other atoms: Cl (4);
  17. 7der (Na: 1) - Lysozyme Alone in H2O
    Other atoms: Cl (4);
  18. 7dfn (Na: 1) - Crystal Structure of Glycoside Hydrolase Family 11 Beta-Xylanase From Streptomyces Olivaceoviridis E-86 in Complex with Alpha-L- Arabinofuranosyl Xylotetraose
    Other atoms: Cl (59);
  19. 7dfo (Na: 13) - Crystal Structure of Glycoside Hydrolase Family 11 Beta-Xylanase From Streptomyces Olivaceoviridis E-86 in Complex with 4-O-Methyl-Alpha-D- Glucuronopyranosyl Xylotetraose
    Other atoms: Cl (43);
  20. 7dgc (Na: 1) - The Structure of the Arabidopsis Thaliana Guanosine Deaminase in Reaction with 2'-O-Methylguanosine
    Other atoms: Zn (2);
  21. 7dii (Na: 4) - Crystal Structure of Leut in Lipidic Cubic Phase at pH 7
  22. 7dix (Na: 3) - Crystal Structure of Leut in Lipidic Cubic Phase at pH 5
  23. 7dj1 (Na: 4) - Crystal Structure of the G26C Mutant of Leut
  24. 7dj2 (Na: 2) - Crystal Structure of the G26C/E290S Mutant of Leut
  25. 7djc (Na: 2) - Crystal Structure of the G26C/Q250A Mutant of Leut
  26. 7djj (Na: 1) - Structure of Four Truncated and Mutated Forms of Quenching Protein Lumenal Domains
  27. 7djk (Na: 5) - Structure of Four Truncated and Mutated Forms of Quenching Protein
    Other atoms: Cl (2);
  28. 7djl (Na: 1) - Structure of Four Truncated and Mutated Forms of Quenching Protein
    Other atoms: Cl (2);
  29. 7djm (Na: 1) - Structure of Four Truncated and Mutated Forms of Quenching Protein
  30. 7djq (Na: 3) - Crystal Structure of O-Acetyl L-Serine Sulfhydrylase From Haemophilus Influenzae in Complex with C-Terminal Peptide of Ribosomal S4 Domain Protein From Lactobacillus Salivarius.
  31. 7dkm (Na: 1) - Phgdh Covalently Linked to Oridonin
    Other atoms: Cl (2);
  32. 7dlh (Na: 1) - Crystallization of Cationic Peroxidase From Proso Millet and Identification of Its Phosphatase Active Sites
    Other atoms: Ca (1); Cl (3); Fe (1);
  33. 7dln (Na: 1) - Structure of Lysozyme Obtained on Ssrf Using Serial Synchrotron Crystallography
    Other atoms: Cl (1);
  34. 7dnb (Na: 1) - Crystal Structure of Phocl Barrel
  35. 7dpd (Na: 1) - Human MCM9 N-Terminal Domain
    Other atoms: Zn (2);
  36. 7dph (Na: 1) - H-Ras Q61H in Complex with Gppnhp (State 1) After Structural Transition By Humidity Control
    Other atoms: Mg (2);
  37. 7dtb (Na: 1) - Room Tempeature Structure of Lysozyme By Fixed-Target Serial Crystallography
    Other atoms: Cl (2);
  38. 7dtf (Na: 1) - Room Temperature Structure of Lysozyme By Serial Millisecond Crystallography
    Other atoms: Cl (2);
  39. 7e02 (Na: 1) - Room Temperature Structure of Lysozyme Delivered in Beef Tallow By Serial Millisecond Crystallography
    Other atoms: Cl (2);
  40. 7e1z (Na: 4) - Cryo Em Structure of A Na+-Bound Na+,K+-Atpase in the E1 State
    Other atoms: Mg (1);
Page generated: Tue Feb 25 11:40:20 2025

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