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Sodium in PDB 5kxi: X-Ray Structure of the Human ALPHA4BETA2 Nicotinic Receptor

Protein crystallography data

The structure of X-Ray Structure of the Human ALPHA4BETA2 Nicotinic Receptor, PDB code: 5kxi was solved by C.L.Morales-Perez, C.M.Noviello, R.E.Hibbs, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.00 / 3.94
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 127.099, 132.633, 202.440, 90.00, 90.00, 90.00
R / Rfree (%) 28.5 / 30.7

Sodium Binding Sites:

The binding sites of Sodium atom in the X-Ray Structure of the Human ALPHA4BETA2 Nicotinic Receptor (pdb code 5kxi). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the X-Ray Structure of the Human ALPHA4BETA2 Nicotinic Receptor, PDB code: 5kxi:

Sodium binding site 1 out of 1 in 5kxi

Go back to Sodium Binding Sites List in 5kxi
Sodium binding site 1 out of 1 in the X-Ray Structure of the Human ALPHA4BETA2 Nicotinic Receptor


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of X-Ray Structure of the Human ALPHA4BETA2 Nicotinic Receptor within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na403

b:84.2
occ:1.00
O C:HOH601 2.4 70.4 1.0
O E:HOH601 2.4 67.9 1.0
O A:HOH501 2.4 69.2 1.0
O D:HOH501 2.4 71.5 1.0
O B:HOH601 2.6 80.1 1.0

Reference:

C.L.Morales-Perez, C.M.Noviello, R.E.Hibbs. X-Ray Structure of the Human Alpha 4 Beta 2 Nicotinic Receptor. Nature V. 538 411 2016.
ISSN: ESSN 1476-4687
PubMed: 27698419
DOI: 10.1038/NATURE19785
Page generated: Mon Aug 18 00:44:09 2025

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